DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and YEA6

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_010910.1 Gene:YEA6 / 856712 SGDID:S000000732 Length:335 Species:Saccharomyces cerevisiae


Alignment Length:363 Identity:97/363 - (26%)
Similarity:156/363 - (42%) Gaps:71/363 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRP 67
            :..||..:..|:|..:|.:.|::.||.:|.|||||:.                    |...:...
Yeast    33 KKNADPRVAAISGALSGALSAMLVCPFDVAKTRLQAQ--------------------GLQNMTHQ 77

  Fly    68 EQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLG 132
            .|..|                           |...|          ...|.::||...|:|||.
Yeast    78 SQHYK---------------------------GFFGT----------FATIFKDEGAAGLYKGLQ 105

  Fly   133 PNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQL 197
            |.::|..|:..|||..|...:.  .|:........|.:..||.:||.:|:.||||||.||||:.|
Yeast   106 PTVLGYIPTLMIYFSVYDFCRK--YSVDIFPHSPFLSNASSAITAGAISTVATNPIWVVKTRLML 168

  Fly   198 D-----YNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKL-LEQRN 256
            .     |::..:.|: ....::..|.|..|.|.|:..:..|:....:.|.:||.:|.:. ..:..
Yeast   169 QTGIGKYSTHYKGTI-DTFRKIIQQEGAKALYAGLVPALLGMLNVAIQFPLYENLKIRFGYSEST 232

  Fly   257 QRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTL----HTVWKEE 317
            ...||...| :|.:.::|..:||.:||.:.||||:.|||::.:.:..|:..:.|    ...:::|
Yeast   233 DVSTDVTSS-NFQKLILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRHLLPLIKITYRQE 296

  Fly   318 GRAGLYRGLATQLVRQIPNTAIMMATYEAVVYVLTRRF 355
            |.||.|.|.||.|||.:|...:.:.::|.....||..|
Yeast   297 GFAGFYSGFATNLVRTVPAAVVTLVSFEYSKKYLTTFF 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 31/147 (21%)
Mito_carr 163..253 CDD:395101 29/95 (31%)
Mito_carr 268..355 CDD:395101 30/90 (33%)
YEA6NP_010910.1 Mito_carr 43..128 CDD:395101 31/143 (22%)
Mito_carr 135..227 CDD:395101 29/92 (32%)
Mito_carr 240..334 CDD:395101 31/94 (33%)

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