DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and FLX1

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_012132.3 Gene:FLX1 / 854672 SGDID:S000001396 Length:311 Species:Saccharomyces cerevisiae


Alignment Length:368 Identity:89/368 - (24%)
Similarity:154/368 - (41%) Gaps:109/368 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQ-SSTAFMTPSRLAENAGGGP-----------ANGGQSEL 64
            :|:|.|||:|..:|..||:::|.||| |:|:       |:.|..||           ||.|:|  
Yeast    13 VISGLSAGSVTTLVVHPLDLLKVRLQLSATS-------AQKAHYGPFMVIKEIIRSSANSGRS-- 68

  Fly    65 LRPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFK 129
                                                                  |.||    |::
Yeast    69 ------------------------------------------------------VTNE----LYR 75

  Fly   130 GLGPNLVGVAPSRAIYFCTYSQTK------------NTLNSLGFVERDSPLVHIMSAASAGFVSS 182
            ||..||.|.|.:..:||..|..||            ..|..:|...:.:.|:::.:.||:|.:::
Yeast    76 GLSINLFGNAIAWGVYFGLYGVTKELIYKSVAKPGETQLKGVGNDHKMNSLIYLSAGASSGLMTA 140

  Fly   183 TATNPIWFVKTRM-------QLDYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVH 240
            ..|||||.:|||:       |..|.|     :...::::....|....:||:..:.||:.:..::
Yeast   141 ILTNPIWVIKTRIMSTSKGAQGAYTS-----MYNGVQQLLRTDGFQGLWKGLVPALFGVSQGALY 200

  Fly   241 FVIYEFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRL---REEGNK 302
            |.:|:.:|.:.|.::.:...|...:.  ||.:...::.|.::..:.||.::.::.|   |....|
Yeast   201 FAVYDTLKQRKLRRKRENGLDIHLTN--LETIEITSLGKMVSVTLVYPFQLLKSNLQSFRANEQK 263

  Fly   303 YNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            :..| ..:..:...:|..|||:||:..|||.||:|.|....||
Yeast   264 FRLF-PLIKLIIANDGFVGLYKGLSANLVRAIPSTCITFCVYE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 38/167 (23%)
Mito_carr 163..253 CDD:395101 23/96 (24%)
Mito_carr 268..355 CDD:395101 24/81 (30%)
FLX1NP_012132.3 Mito_carr 5..105 CDD:395101 38/158 (24%)
Mito_carr 122..215 CDD:395101 24/97 (25%)
Mito_carr 223..311 CDD:395101 24/86 (28%)

Return to query results.
Submit another query.