DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and RIM2

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_009751.1 Gene:RIM2 / 852491 SGDID:S000000396 Length:377 Species:Saccharomyces cerevisiae


Alignment Length:378 Identity:130/378 - (34%)
Similarity:190/378 - (50%) Gaps:79/378 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQ 69
            |....:|.:|||..|..|||||||.::|||||||..........|.|...|              
Yeast    49 TVKPWVHFVAGGIGGMAGAVVTCPFDLVKTRLQSDIFLKAYKSQAVNISKG-------------- 99

  Fly    70 RRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMS-IVQCLRH----------IVQNEG 123
                                             ||.|||:: ::|...|          :.:.||
Yeast   100 ---------------------------------STRPKSINYVIQAGTHFKETLGIIGNVYKQEG 131

  Fly   124 PRALFKGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPI 188
            .|:||||||||||||.|:|:|.|.||..||:.........:::|::|:|:||:||:.::||||||
Yeast   132 FRSLFKGLGPNLVGVIPARSINFFTYGTTKDMYAKAFNNGQETPMIHLMAAATAGWATATATNPI 196

  Fly   189 WFVKTRMQLDYNSKVQMTVRQ------CIERVYAQGGVAAFYKGITASYFGICETMVHFVIYE-- 245
            |.:|||:|||...|.  :|||      |::.|....|....|||::|||.|..|.::.:::||  
Yeast   197 WLIKTRVQLDKAGKT--SVRQYKNSWDCLKSVIRNEGFTGLYKGLSASYLGSVEGILQWLLYEQM 259

  Fly   246 --FIKSKLLEQRNQRHTDTKGS----RDFLEFMMAGAVSKTIASCIAYPHEVARTRLR----EEG 300
              .||.:.:|:...:...||.:    :::.:...:..::|.:||...|||||.|||||    |.|
Yeast   260 KRLIKERSIEKFGYQAEGTKSTSEKVKEWCQRSGSAGLAKFVASIATYPHEVVRTRLRQTPKENG 324

  Fly   301 -NKYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAVVYVLT 352
             .||....|:...:.||||...:|.||...|:|.:||:.||..|:|.|:.:|:
Yeast   325 KRKYTGLVQSFKVIIKEEGLFSMYSGLTPHLMRTVPNSIIMFGTWEIVIRLLS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 52/158 (33%)
Mito_carr 163..253 CDD:395101 39/99 (39%)
Mito_carr 268..355 CDD:395101 35/90 (39%)
RIM2NP_009751.1 PTZ00169 <72..264 CDD:240302 78/240 (33%)
Mito_carr 294..377 CDD:395101 34/82 (41%)

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