DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and FOLT1

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_569032.1 Gene:FOLT1 / 836770 AraportID:AT5G66380 Length:308 Species:Arabidopsis thaliana


Alignment Length:355 Identity:88/355 - (24%)
Similarity:137/355 - (38%) Gaps:69/355 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTTIL 78
            ||..||.........|:||:||.|                   .|.|:                 
plant    12 AGAVAGFATVAAMHSLDVVRTRFQ-------------------VNDGR----------------- 40

  Fly    79 RNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRA 143
                                   .|:.|...:....:..|.:.||.|.|:.|..|.::|...|..
plant    41 -----------------------GSSLPTYKNTAHAVFTIARLEGLRGLYAGFFPAVIGSTVSWG 82

  Fly   144 IYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLD---YNSKVQM 205
            :||..|.:.|.........|:.||.:|:.|||.||.:....|||||.||||:||.   :.::...
plant    83 LYFFFYGRAKQRY
ARGRDDEKLSPALHLASAAEAGALVCLCTNPIWLVKTRLQLQTPLHQTQPYS 147

  Fly   206 TVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKL--LEQRNQRHTDTKGSRDF 268
            .:......:..:.|..|.||||......:....:.|..||.::..:  |::|.::...|....:.
plant   148 GLLDAFRTIVKEEGPRALYKGIVPGLVLVSHGAIQFTAYEELRKIIVD
LKERRRKSESTDNLLNS 212

  Fly   269 LEFMMAGAVSKTIASCIAYPHEVARTRL--REEGNKYNSFWQTLHTV---WKEEGRAGLYRGLAT 328
            .::...|..||..|..:.||.:|.|.||  |...|....:..:||.:   .:.||..|.||||..
plant   213 ADYAALGGSSKVAAVLLTYPFQVIRARLQQRPSTNGIPRYIDSLHVIRETARYEGLRGFYRGLTA 277

  Fly   329 QLVRQIPNTAIMMATYEAVVYVLTRRFNNK 358
            .|::.:|.::|....||.|:.:|.:....|
plant   278 NLLKNVPASSITFIVYENVLKLLKQHPTTK 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 27/141 (19%)
Mito_carr 163..253 CDD:395101 29/94 (31%)
Mito_carr 268..355 CDD:395101 28/91 (31%)
FOLT1NP_569032.1 Mito_carr 7..95 CDD:395101 27/141 (19%)
Mito_carr 102..195 CDD:395101 29/92 (32%)
Mito_carr 210..303 CDD:395101 28/92 (30%)

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