Protein Alignment Rim2 and SHS1

DIOPT Version :10

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_194966.1
• Gene: SHS1 / 829375
• AraportID: AT4G32400
• Length: 392
• Species: Arabidopsis thaliana
• Alignment Length: 365
• Identity: 77/365 - (21%)
• Similarity: 133/365 - (36%)
• Gaps: 98/365 - (26%)

  Fly     8 TLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRK 72
            :|..|::|..||.|...|..|||.::|.|.              .|.|
plant   110 SLRRLLSGAVAGAVSRTVVAPLETIRTHLM--------------VGSG----------------- 143

  Fly    73 LSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVG 137
                                       |.|||        :....|:::||...||:|...|::.
plant   144 ---------------------------GNSST--------EVFSDIMKHEGWTGLFRGNLVNVIR 173

  Fly   138 VAPSRAIYFCTYSQTKNTLNSLGFVERDSPL-VHIMSAASAGFVSSTATNPIWFVKTRMQLDYNS 201
            |||:||:....:......|:.....|...|: ..:::.|.||...:..|.|:..||||:.:...
plant   174 VAPARAVELFVFETVNKKLSPPHGQESKIPIPASLLAGACAGVSQTLLTYPLELVKTRLTIQRG- 237

  Fly   202 KVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTKGS 265
             |...:.....::..:.|....|:|:..|..|:.. ...::..|:.::              |..
plant   238 -VYKGIFDAFLKIIREEGPTELYRGLAPSLIGVVPYAATNYFAYDSLR--------------KAY 287

  Fly   266 RDF--------LEFMMAGAVSKTIASCIAYPHEVARTRLREEGNK----YNSFWQTLHTVWKEEG 318
            |.|        :|.::.|:::..::|...:|.||||..::.....    |.:....|.|:.:.||
plant   288 RSFSKQEKIGNIETLLIGSLAGALSSTATFPLEVARKHMQVGAVSGRVVYKNMLHALVTILEHEG 352

  Fly   319 RAGLYRGLATQLVRQIPNTAIMMATYEAVVYVLTRRFNNK 358
            ..|.|:||....::.:|...|....|||...:|..  ||:
plant   353 ILGWYKGLGPSCLKLVPAAGISFMCYEACKKILIE--NNQ 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:395101	30/147 (20%)
		Mito_carr	163..253	CDD:395101	18/91 (20%)
		Mito_carr	268..355	CDD:395101	24/98 (24%)
SHS1	NP_194966.1	PTZ00169	105..359	CDD:240302	67/330 (20%)