DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and AT3G21390

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001327267.1 Gene:AT3G21390 / 821693 AraportID:AT3G21390 Length:357 Species:Arabidopsis thaliana


Alignment Length:363 Identity:74/363 - (20%)
Similarity:130/363 - (35%) Gaps:80/363 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKL 73
            :|...|||.||.:..:||.||:|:|.|.|                              .|....
plant    38 VIDASAGGVAGAISRMVTSPLDVIKIRFQ------------------------------VQLEPT 72

  Fly    74 STTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGV 138
            :|..|::                     |...||...:.:..:.|.:.||....::|..|.|:.|
plant    73 ATWALKD---------------------SQLKPKYNGLFRTTKDIFREEGLSGFWRGNVPALLMV 116

  Fly   139 APSRAIYFCTYSQTKNTLNSLGFVERD---SPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYN 200
            .|..:|.|....:.|:........|..   ||.:..:|.|.||..::..:.|...::|.:.....
plant   117 VPYTSIQFAVLHKVKSFAAGSSKAENHAQLSPYLSYISGALAGCAATVGSYPFDLLRTVLASQGE 181

  Fly   201 SKVQMTVRQCIERVYAQGGVAAFYKGITAS----------YFGICETMVHFVIYEFIKSKLLEQR 255
            .||...:|.....:....|:...|.|::.:          .||..:|   |..:..:.:|.....
plant   182 PKVYPNMRSAFLSIVQTRGIKGLYAGLSPTLIEIIPYAGLQFGTYDT---FKRWSMVYNKRYRSS 243

  Fly   256 NQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEG-------------NKYNSFW 307
            :...|:...|....:..:.|..|.|::..:.:|.:|.:.|.:.||             |.|.:.:
plant   244 SSSSTNPSDSLSSFQLFLCGLASGTVSKLVCHPLDVVKKRFQVEGLQRHPKYGARVELNAYKNMF 308

  Fly   308 QTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            ..|..:.:.||..|||:|:....::..|..|:....||
plant   309 DGLGQILRSEGWHGLYKGIVPSTIKAAPAGAVTFVAYE 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 31/146 (21%)
Mito_carr 163..253 CDD:395101 20/102 (20%)
Mito_carr 268..355 CDD:395101 21/91 (23%)
AT3G21390NP_001327267.1 PTZ00169 33..346 CDD:240302 72/361 (20%)

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