DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and UCP1

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_068605.1 Gene:UCP1 / 7350 HGNCID:12517 Length:307 Species:Homo sapiens


Alignment Length:301 Identity:76/301 - (25%)
Similarity:117/301 - (38%) Gaps:53/301 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQNTADTL-IHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANG-----G 60
            |.:...|| :.|.:.|.|..:..|:|.||:..|.|||......|.|.:......|....     |
Human     6 ASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLGTITAVVKTEG 70

  Fly    61 QSEL---LRPEQRRKLSTTILR--------------NRSQPQV---------IGGVR-------- 91
            :.:|   |....:|::|:..||              ..:.|.:         .|||.        
Human    71 RMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGLTTGGVAVFIGQPTE 135

  Fly    92 ----RIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCTYSQT 152
                |:.|.||  :....|:........|.|...||...|:||..|||:...........||...
Human   136 VVKVRLQAQSH--LHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRSVIINCTELVTYDLM 198

  Fly   153 KNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSK--VQMTVRQCIERVY 215
            |........:..|.| .|::||..|||.::..::|:..||||.   .||.  ...:|..|..:|:
Human   199 KEAFVKNNILADDVP-CHLVSALIAGFCATAMSSPVDVVKTRF---INSPPGQYKSVPNCAMKVF 259

  Fly   216 AQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQR 255
            ...|..||:||:..|:..:.. .::.||.:|.:|.:|.:.|
Human   260 TNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 45/191 (24%)
Mito_carr 163..253 CDD:395101 29/92 (32%)
Mito_carr 268..355 CDD:395101
UCP1NP_068605.1 Mito_carr 10..104 CDD:395101 23/93 (25%)
Solcar 1 11..102 23/90 (26%)
Mito_carr 111..206 CDD:395101 22/96 (23%)
Solcar 2 111..201 22/91 (24%)
Solcar 3 210..295 28/88 (32%)
Mito_carr 215..300 CDD:395101 27/87 (31%)
Blue background indicates that the domain is not in the aligned region.

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