DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and slc25a25b

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_009299818.1 Gene:slc25a25b / 569227 ZFINID:ZDB-GENE-060526-340 Length:536 Species:Danio rerio


Alignment Length:353 Identity:87/353 - (24%)
Similarity:141/353 - (39%) Gaps:85/353 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRP 67
            :||.....||:|||.||.|....|.||:.:|..:|                              
Zfish   248 KNTGMWWRHLVAGGGAGAVSRTCTAPLDRLKVLMQ------------------------------ 282

  Fly    68 EQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLG 132
                                             :.:|...||.|......:::..|.|:|::|.|
Zfish   283 ---------------------------------VHATRSNSMGIAGGFTQMIREGGLRSLWRGNG 314

  Fly   133 PNLVGVAPSRAIYFCTYSQTKNTLNS----LGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKT 193
            .|::.:||..||.|..|.|.|..:.|    ||.:||      ::|.:.||.::.::..|:..:||
Zfish   315 INVLKIAPESAIKFMAYEQIKRLIGSNQETLGILER------LVSGSLAGAIAQSSIYPMEVLKT 373

  Fly   194 RMQLDYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQ 257
            |:.|....:.. .:..|.:.::.:.|:.|||||...:..||.. ..:...:||.:|:..|    |
Zfish   374 RLALGRTGQYS-GIADCAKHIFKKEGMTAFYKGYIPNMLGIIPYAGIDLAVYETLKNSWL----Q 433

  Fly   258 RHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTL-----HTVWKEE 317
            |.............:..|.:|.|.....:||..:.|||::.:.::..|...|:     |.| :.|
Zfish   434 RFATDSADPGVFVLLACGTMSSTCGQLASYPLALVRTRMQAQASQEGSPQMTMSGLFRHIV-RTE 497

  Fly   318 GRAGLYRGLATQLVRQIPNTAIMMATYE 345
            |..|||||||...::.||..:|....||
Zfish   498 GAIGLYRGLAPNFMKVIPAVSISYVVYE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 31/147 (21%)
Mito_carr 163..253 CDD:395101 22/90 (24%)
Mito_carr 268..355 CDD:395101 26/83 (31%)
slc25a25bXP_009299818.1 FRQ1 66..210 CDD:444056
PTZ00169 258..512 CDD:240302 78/328 (24%)
Blue background indicates that the domain is not in the aligned region.

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