DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rim2 and LOC566378

DIOPT Version :9

Sequence 1:	NP_608615.1	Gene:	Rim2 / 33350	FlyBaseID:	FBgn0031359	Length:	365	Species:	Drosophila melanogaster
Sequence 2:	XP_001922909.3	Gene:	LOC566378 / 566378	-ID:	-	Length:	312	Species:	Danio rerio

Alignment Length:	361	Identity:	80/361 - (22%)
Similarity:	131/361 - (36%)	Gaps:	98/361 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 DTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRR 71
            :||:|.:||.........|..||:..:.|||..                            |.|:
Zfish    14 ETLVHAVAGAMGSVTAMTVFFPLDTARIRLQVD----------------------------ENRK 50

  Fly    72 KLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLV 136
            ..||.|:                                    |..|.:.||..:|::|..|.:.
Zfish    51 SQSTPII------------------------------------LAEIAKEEGVLSLYRGWFPVIS 79

  Fly   137 GVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLD--- 198
            .:..|..:||.|:    |||..:...:|..|...::....:|.|:...|.|:|.|.||::|.
Zfish    80 SLCCSNFVYFYTF----NTLKRVMVTDRSRPSTDLLMGFISGAVNVLLTTPMWVVNTRLKLQGAK 140

  Fly   199 -YNSKVQMT----VRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQR 258
             .|.::..|    :.....::.|..||...:.|...|...:....|.|:.||.:|.|.
Zfish   141 FRNEELHQTHYKGIVDAFSQIIAHEGVGTLWNGTLPSLVLVFNPAVQFMFYEAMKRKA------- 198

  Fly   259 HTDTKGSRDF--LEFMMAGAVSKTIASCIAYPHEVARTRLR-------EEGNKYNSFWQTLHTVW 314
               .:|.|..  .|..:.||::|.||:...||.:..:..||       ::|....|....:..:.
Zfish   199 ---GRGGRKISSFEIFLIGAIAKAIATTATYPLQTVQAILRFGQYKSDDKGGLVGSLRNVVSLLM 260

  Fly   315 ---KEEGRAGLYRGLATQLVRQIPNTAIMMATYEAV 347
               |..|..|||:||..:|::.:...|:|...||.:
Zfish   261 DRIKRHGLLGLYKGLEAKLLQTVLTAALMFVVYEKI 296

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	28/147 (19%)
		Mito_carr	163..253	CDD:278578	24/97 (25%)
		Mito_carr	268..355	CDD:278578	24/92 (26%)
LOC566378	XP_001922909.3	Mito_carr	11..103	CDD:278578	30/156 (19%)
		PTZ00169	24..296	CDD:240302	75/349 (21%)
		Mito_carr	102..196	CDD:278578	22/93 (24%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG4266
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53601
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820