DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and SLC25A36

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001098117.1 Gene:SLC25A36 / 55186 HGNCID:25554 Length:311 Species:Homo sapiens


Alignment Length:358 Identity:177/358 - (49%)
Similarity:220/358 - (61%) Gaps:56/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELL 65
            |:|.  |||:||.|||..|||||::||||||||||||||:..:..|.:..|...|          
Human     1 MSQR--DTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAG---------- 53

  Fly    66 RPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKG 130
                                  ..|.|::             |...:.||:.|::.||||:||:|
Human    54 ----------------------ASVNRVV-------------SPGPLHCLKVILEKEGPRSLFRG 83

  Fly   131 LGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRM 195
            ||||||||||||||||..||..|..||.:  .:.||..||::|||.|||.:.|||||||.:|||:
Human    84 LGPNLVGVAPSRAIYFAAYSNCKEKLNDV--FDPDSTQVHMISAAMAGFTAITATNPIWLIKTRL 146

  Fly   196 QLDYNSKVQ--MTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQR--- 255
            |||..::.:  |...:|:.:||...|:..||:|::|||.||.||::||||||.||.||||.:   
Human   147 QLDARNRGERRMGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHFVIYESIKQKLLEYKTAS 211

  Fly   256 --NQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEG 318
              .......|.:.||:..|:|.|.|||.|:.|||||||.||||||||.||.||:|||..:.:|||
Human   212 TMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTRLREEGTKYRSFFQTLSLLVQEEG 276

  Fly   319 RAGLYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            ...|||||.|.||||||||||||||||.|||:|
Human   277 YGSLYRGLTTHLVRQIPNTAIMMATYELVVYLL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 61/147 (41%)
Mito_carr 163..253 CDD:278578 48/91 (53%)
Mito_carr 268..355 CDD:278578 59/84 (70%)
SLC25A36NP_001098117.1 Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 4..108 62/150 (41%)
Mito_carr 6..111 CDD:365909 62/149 (42%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 116..203 46/86 (53%)
Mito_carr 117..206 CDD:365909 47/88 (53%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 224..308 58/83 (70%)
Mito_carr 226..311 CDD:365909 59/84 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5854
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10039
Inparanoid 1 1.050 310 1.000 Inparanoid score I2604
Isobase 1 0.950 - 0 Normalized mean entropy S1076
OMA 1 1.010 - - QHG53601
OrthoDB 1 1.010 - - D1372287at2759
OrthoFinder 1 1.000 - - FOG0002320
OrthoInspector 1 1.000 - - otm40440
orthoMCL 1 0.900 - - OOG6_103444
Panther 1 1.100 - - O PTHR45829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1930
SonicParanoid 1 1.000 - - X1747
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

Return to query results.
Submit another query.