DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and SLC25A39

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_011523182.1 Gene:SLC25A39 / 51629 HGNCID:24279 Length:365 Species:Homo sapiens


Alignment Length:365 Identity:94/365 - (25%)
Similarity:151/365 - (41%) Gaps:56/365 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKL 73
            |..::|.|:...|.::...||:|||.||||....|.                 |||:...:...|
Human    12 LQQMVASGTGAVVTSLFMTPLDVVKVRLQSQRPSMA-----------------SELMPSSRLWSL 59

  Fly    74 STTILRNRSQPQ-----VIGGVRRIMAISHCGISSTT-----PKSMSIVQCLRHIVQNEGPRALF 128
            |.|.|.:..|..     ...||...:.:...|....|     .:....:.....||::||.|.|:
Human    60 SYTKLPSSLQSTGKCLLYCNGVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLW 124

  Fly   129 KGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFV-ERDSPLVHIMSAASAGFVSSTATNPIWFVK 192
            .||...||...|:.||||..|.|.|..|...... :..:|:|   :.|.|...:.|..:|:..::
Human   125 SGLPATLVMTVPATAIYFTAYDQLKAFL
CGRALTSDLYAPMV---AGALARLGTVTVISPLELMR 186

  Fly   193 TRMQLDYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVH-------FVIYEFIKSK 250
            |::|..:.|..::..  |:....||||..:.:.|...:........||       :..||.:||.
Human   187 TKLQAQHVSYRELGA--CVRTAVAQGGWRSLWLGWGPTALRDVPFSVHPPPQALYWFNYELVKSW 249

  Fly   251 LLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTR----------LREEGNKYNS 305
            |...|.:..|....|      .:||.:|.|:|:.:..|.:|.:|:          :|......:|
Human   250 LNG
FRPKDQTSVGMS------FVAGGISGTVAAVLTLPFDVVKTQRQVALGAMEAVRVNPLHVDS 308

  Fly   306 FWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            .|..|..:..|.|..||:.|...::::..|:.|||::|||
Human   309 TWLLLRRIRAESGTKGLFAGFLPRIIKAAPSCAIMISTYE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 44/156 (28%)
Mito_carr 163..253 CDD:395101 22/96 (23%)
Mito_carr 268..355 CDD:395101 24/88 (27%)
SLC25A39XP_011523182.1 Mito_carr 9..152 CDD:395101 44/156 (28%)
Mito_carr 161..252 CDD:395101 22/95 (23%)
Mito_carr 257..356 CDD:395101 26/98 (27%)

Return to query results.
Submit another query.