DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a36

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_576451.4 Gene:Slc25a36 / 501039 RGDID:1591928 Length:311 Species:Rattus norvegicus


Alignment Length:358 Identity:178/358 - (49%)
Similarity:222/358 - (62%) Gaps:56/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELL 65
            |:|.  |||:||.|||..|||||::||||||||||||||:..:..|.:..|...|          
  Rat     1 MSQR--DTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAG---------- 53

  Fly    66 RPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKG 130
                                  ..|.|::             |...:.||:.|::.||||:||:|
  Rat    54 ----------------------ASVNRVV-------------SPGPLHCLKVILEKEGPRSLFRG 83

  Fly   131 LGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRM 195
            ||||||||||||||||..||..|..||  |..:.||..||::|||.|||.:.|||||||.:|||:
  Rat    84 LGPNLVGVAPSRAIYFAAYSNCKEKLN--GVFDPDSTQVHMISAAMAGFTAITATNPIWLIKTRL 146

  Fly   196 QLDYNSK--VQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQR 258
            |||..::  .:|...:|:.:||...|:..||:|::|||.||.||::||||||.||.||||.:...
  Rat   147 QLDARNRGEKRMGAFECVRKVYQTDGLRGFYRGMSASYAGISETVIHFVIYESIKQKLLECKTAS 211

  Fly   259 HTDT-----KGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEG 318
            ..:|     |.:.||:..|:|.|.|||.|:.:||||||.||||||||.||.||:|||..:.:|||
  Rat   212 MMETDEESVKEASDFVRMMLAAATSKTCATTVAYPHEVVRTRLREEGTKYRSFFQTLSLIVQEEG 276

  Fly   319 RAGLYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            ...|||||.|.||||||||||||||||.|||:|
  Rat   277 YGSLYRGLTTHLVRQIPNTAIMMATYELVVYLL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 61/147 (41%)
Mito_carr 163..253 CDD:278578 48/91 (53%)
Mito_carr 268..355 CDD:278578 58/84 (69%)
Slc25a36XP_576451.4 Mito_carr 2..113 CDD:395101 66/159 (42%)
Mito_carr 114..206 CDD:395101 48/91 (53%)
Mito_carr 226..311 CDD:395101 58/84 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5664
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10039
Inparanoid 1 1.050 314 1.000 Inparanoid score I2488
OMA 1 1.010 - - QHG53601
OrthoDB 1 1.010 - - D1372287at2759
OrthoFinder 1 1.000 - - FOG0002320
OrthoInspector 1 1.000 - - otm44582
orthoMCL 1 0.900 - - OOG6_103444
Panther 1 1.100 - - O PTHR45829
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1747
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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