DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and slc25a36a

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001002667.1 Gene:slc25a36a / 436940 ZFINID:ZDB-GENE-040718-415 Length:311 Species:Danio rerio


Alignment Length:358 Identity:176/358 - (49%)
Similarity:227/358 - (63%) Gaps:56/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELL 65
            |:|.  |||:||.|||..|||||::||||||||||||||:.....|.:                 
Zfish     1 MSQR--DTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTFYISEV----------------- 46

  Fly    66 RPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKG 130
                  :|||                    ::...::...|...  :.||:.|::.||||:||:|
Zfish    47 ------QLST--------------------VNGASVARMAPPGP--LHCLKLILEKEGPRSLFRG 83

  Fly   131 LGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRM 195
            ||||||||||||||||..||.:|..||::  .:.||..||::||..|||.:.|||||||.:|||:
Zfish    84 LGPNLVGVAPSRAIYFAAYSTSKEKLNNV--FDPDSTQVHMLSAGLAGFTAITATNPIWLIKTRL 146

  Fly   196 QLDYNSKVQ--MTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQR 258
            |||..::.:  |:..:|:.|||...|:..||:|::|||.||.||::||||||.||.||:|.:...
Zfish   147 QLDARNRGERRMSAFECVRRVYQSDGLRGFYRGMSASYAGISETVIHFVIYESIKRKLIEHKANS 211

  Fly   259 HTD-----TKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEG 318
            :.|     .|.:.||:..|:|.|.|||.|:.|||||||.||||||||:||.||:|||:.|::|||
Zfish   212 NMDDEDESVKDASDFVGMMLAAATSKTCATSIAYPHEVIRTRLREEGSKYRSFFQTLNMVFREEG 276

  Fly   319 RAGLYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            ...|||||.|.||||||||||||.|||.|||:|
Zfish   277 YRALYRGLTTHLVRQIPNTAIMMCTYELVVYLL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 60/147 (41%)
Mito_carr 163..253 CDD:395101 48/91 (53%)
Mito_carr 268..355 CDD:395101 59/84 (70%)
slc25a36aNP_001002667.1 Mito_carr 2..113 CDD:395101 64/159 (40%)
Solcar 1 4..108 61/150 (41%)
Mito_carr 114..208 CDD:395101 49/93 (53%)
Solcar 2 116..203 46/86 (53%)
Solcar 3 224..308 58/83 (70%)
Mito_carr 226..311 CDD:395101 59/84 (70%)

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