DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and slc25a36a

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001002667.1 Gene:slc25a36a / 436940 ZFINID:ZDB-GENE-040718-415 Length:311 Species:Danio rerio


Alignment Length:358 Identity:176/358 - (49%)
Similarity:227/358 - (63%) Gaps:56/358 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQNTADTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELL 65
            |:|.  |||:||.|||..|||||::||||||||||||||:.....|.:                 
Zfish     1 MSQR--DTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTFYISEV----------------- 46

  Fly    66 RPEQRRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKG 130
                  :|||                    ::...::...|...  :.||:.|::.||||:||:|
Zfish    47 ------QLST--------------------VNGASVARMAPPGP--LHCLKLILEKEGPRSLFRG 83

  Fly   131 LGPNLVGVAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRM 195
            ||||||||||||||||..||.:|..||::  .:.||..||::||..|||.:.|||||||.:|||:
Zfish    84 LGPNLVGVAPSRAIYFAAYSTSKEKLNNV--FDPDSTQVHMLSAGLAGFTAITATNPIWLIKTRL 146

  Fly   196 QLDYNSKVQ--MTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQR 258
            |||..::.:  |:..:|:.|||...|:..||:|::|||.||.||::||||||.||.||:|.:...
Zfish   147 QLDARNRGERRMSAFECVRRVYQSDGLRGFYRGMSASYAGISETVIHFVIYESIKRKLIEHKANS 211

  Fly   259 HTD-----TKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEG 318
            :.|     .|.:.||:..|:|.|.|||.|:.|||||||.||||||||:||.||:|||:.|::|||
Zfish   212 NMDDEDESVKDASDFVGMMLAAATSKTCATSIAYPHEVIRTRLREEGSKYRSFFQTLNMVFREEG 276

  Fly   319 RAGLYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            ...|||||.|.||||||||||||.|||.|||:|
Zfish   277 YRALYRGLTTHLVRQIPNTAIMMCTYELVVYLL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 60/147 (41%)
Mito_carr 163..253 CDD:278578 48/91 (53%)
Mito_carr 268..355 CDD:278578 59/84 (70%)
slc25a36aNP_001002667.1 Mito_carr 2..113 CDD:278578 64/159 (40%)
Solcar 1 4..108 61/150 (41%)
PTZ00169 5..290 CDD:240302 156/331 (47%)
Mito_carr 114..208 CDD:278578 49/93 (53%)
Solcar 2 116..203 46/86 (53%)
Solcar 3 224..308 58/83 (70%)
Mito_carr 226..311 CDD:278578 59/84 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5762
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10039
Inparanoid 1 1.050 313 1.000 Inparanoid score I2555
OMA 1 1.010 - - QHG53601
OrthoDB 1 1.010 - - D1372287at2759
OrthoFinder 1 1.000 - - FOG0002320
OrthoInspector 1 1.000 - - otm24946
orthoMCL 1 0.900 - - OOG6_103444
Panther 1 1.100 - - O PTHR45829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1930
SonicParanoid 1 1.000 - - X1747
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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