DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and slc25a40

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001002360.1 Gene:slc25a40 / 436633 ZFINID:ZDB-GENE-040718-52 Length:353 Species:Danio rerio


Alignment Length:358 Identity:79/358 - (22%)
Similarity:141/358 - (39%) Gaps:78/358 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTT 76
            ::|..|...:.:::..||:|||.|||:..                         .|..:.|... 
Zfish    20 MMASCSGAIITSLLVTPLDVVKIRLQAQK-------------------------NPFPKGKCFV- 58

  Fly    77 ILRNRSQPQVIGGVRRIMAISHCGISSTTPKS----MSIVQCLRHIVQNEGPRALFKGLGPNLVG 137
                     ...|:...:.:...|.:....|:    ...:.....|::.||.|:|:.||.|.|:.
Zfish    59 ---------YCNGLMDHICVCENGNTKVWYKAPGHFSGTLDAFLKIIRMEGIRSLWSGLPPTLIM 114

  Fly   138 VAPSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSK 202
            ..|:..|||..|.|. ..|..|...:| |.|..:.:.|.|...|:|..:|:..::|:||.:..|.
Zfish   115 AVPATVIYFTCYDQL-FALLKLKMGDR-SDLAPLFAGAIARVGSATVISPLELIRTKMQSEKQSY 177

  Fly   203 VQMTVRQCIERVYAQGGVAAFYKG----------ITASYFGICETMVHFVIYEFIKSKLLEQRNQ 257
            .:|:.  .|.......|:.:.::|          .:|.|:           :.:.|.|....:..
Zfish   178 REMSA--VIRSALKNEGLRSLWRGWGPTLLRDVPFSAMYW-----------FNYEKGKWWLCKRY 229

  Fly   258 RHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKY----------NSFWQTLHT 312
            ..::...:..|    .|||:|.:|||.|..|.:|.:|:.:.|..:.          :|....:..
Zfish   230 SCSEPTVAITF----TAGALSGSIASIITLPFDVVKTKRQVEMGELQTMKLSTQVSSSTCSVMKR 290

  Fly   313 VWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            :..|.|.:||:.|...:|::..|..|||::|||
Zfish   291 IVAENGVSGLFAGFMPRLIKVAPACAIMISTYE 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 30/147 (20%)
Mito_carr 163..253 CDD:395101 20/99 (20%)
Mito_carr 268..355 CDD:395101 27/88 (31%)
slc25a40NP_001002360.1 Mito_carr 12..129 CDD:395101 29/143 (20%)
Solcar 1 14..132 30/147 (20%)
Solcar 2 140..224 20/97 (21%)
Mito_carr 143..229 CDD:395101 18/98 (18%)
Mito_carr 232..333 CDD:395101 27/96 (28%)
Solcar 3 234..328 27/94 (29%)

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