Protein Alignment Rim2 and GC2

DIOPT Version :9

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_731657.2
• Gene: GC2 / 41449
• FlyBaseID: FBgn0037970
• Length: 319
• Species: Drosophila melanogaster
• Alignment Length: 355
• Identity: 80/355 - (22%)
• Similarity: 138/355 - (38%)
• Gaps: 98/355 - (27%)

  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTT 76
            :|.||.||.:|.....||::||||||:.|.             || ||           .::.|
  Fly    24 IINGGVAGIIGVACVYPLDMVKTRLQNQTI-------------GP-NG-----------ERMYT- 62

  Fly    77 ILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPS 141
                                             ||..|.|..:.:||...:::|...|:|.:.|.
  Fly    63 ---------------------------------SIADCFRKTIASEGYFGMYRGSAVNIVLITPE 94

  Fly   142 RAIYFCTYSQTKNTLNSL--GFVERDSPLVHIMSAASAGFVSS----TATNPIWFVKTRMQLDYN 200
            :||        |.|.|..  ..:..|..::.:..|..||.::.    ..|.|:..:|.:||  ..
  Fly    95 KAI--------KLTANDFFRYHLASDDGVIPLSRATLAGGLAGLFQIVVTTPMELLKIQMQ--DA 149

  Fly   201 SKVQMTVRQC---IERVYAQG---------GVAAFYKGITASYFGICE---TMVHFVIYEFIKSK 250
            .:|....|..   ::.:.|.|         |:...|||:.|:  |:.:   :||:|.:..:|
  Fly   150 GRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVGAT--GVRDITFSMVYFPLMAWI--- 209

  Fly   251 LLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEG-NKYNSFWQTLHTVW 314
              ..:..|.:|..|...|...::||.:|...::.:..|.:|.:|||:.:| .|:......::...
  Fly   210 --NDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQADGEKKFKGIMDCVNRTL 272

  Fly   315 KEEGRAGLYRGLATQLVRQIPNTAIMMATY 344
            ||||.:..::|...:::...|...|....|
  Fly   273 KEEGISAFFKGGLCRIMVLAPLFGIAQMFY 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	33/143 (23%)
		Mito_carr	163..253	CDD:278578	23/108 (21%)
		Mito_carr	268..355	CDD:278578	19/78 (24%)
GC2	NP_731657.2	PTZ00169	14..289	CDD:240302	77/340 (23%)
		Mito_carr	16..106	CDD:278578	35/148 (24%)
		Mito_carr	123..203	CDD:278578	19/83 (23%)
		Mito_carr	228..302	CDD:278578	17/73 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442097
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930