Protein Alignment Rim2 and GC1

DIOPT Version :9

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_001262490.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 298
• Identity: 74/298 - (24%)
• Similarity: 117/298 - (39%)
• Gaps: 73/298 - (24%)

  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRL-------------AENAGGGPANGGQSE 63
            :|.||.||.:|.....||::||||||:........|:             ||...|.....|.:.
  Fly    25 IINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89

  Fly    64 LL-RPEQ----------RRKLSTTILRNRSQP----QVIGGVR---------------------- 91
            || .||:          |.||:|   ::...|    .|.||:.
  Fly    90 LLITPEKAIKLTANDYFRHKLTT---KDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAG 151

  Fly    92 RIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCTYSQTKNTL 156
            |:.|.:.  ::..|.:.:|..|....:::::|...|:||:|...:.......|||..::    ||
  Fly   152 RVAAAAK--LAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFA----TL 210

  Fly   157 NSLGFVERDSP-----LVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNS---KVQMTVRQCIER 213
            |.||....|..     ....::..:||..::.|.||...||||:|....:   |....:..||.:
  Fly   211 NDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCITK 275

  Fly   214 VYAQGGVAAFYKG------ITASYFGICETMVHFVIYE 245
            .....|..||:||      :.|..|||.:|:.:..:.|
  Fly   276 TLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAE 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	44/193 (23%)
		Mito_carr	163..253	CDD:278578	25/97 (26%)
		Mito_carr	268..355	CDD:278578
GC1	NP_001262490.1	Mito_carr	36..113	CDD:278578	21/79 (27%)
		Mito_carr	115..213	CDD:278578	20/103 (19%)
		Mito_carr	226..307	CDD:278578	23/80 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442096
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930