Protein Alignment Rim2 and GC1

DIOPT Version :10

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_650134.1
• Gene: GC1 / 41448
• FlyBaseID: FBgn0260743
• Length: 321
• Species: Drosophila melanogaster
• Alignment Length: 298
• Identity: 74/298 - (24%)
• Similarity: 117/298 - (39%)
• Gaps: 73/298 - (24%)

  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRL-------------AENAGGGPANGGQSE 63
            :|.||.||.:|.....||::||||||:........|:             ||...|.....|.:.
  Fly    25 IINGGIAGIIGVTCVFPLDLVKTRLQNQQIGPNGERMYNSMFDCFRKTYKAEGYFGMYRGSGVNI 89

  Fly    64 LL-RPEQ----------RRKLSTTILRNRSQP----QVIGGVR---------------------- 91
            || .||:          |.||:|   ::...|    .|.||:.
  Fly    90 LLITPEKAIKLTANDYFRHKLTT---KDGKLPLTSQMVAGGLAGAFQIIVTTPMELLKIQMQDAG 151

  Fly    92 RIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCTYSQTKNTL 156
            |:.|.:.  ::..|.:.:|..|....:::::|...|:||:|...:.......|||..::    ||
  Fly   152 RVAAAAK--LAGKTVEKVSATQLASQLIKDKGIFGLYKGIGATGLRDVTFSIIYFPLFA----TL 210

  Fly   157 NSLGFVERDSP-----LVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNS---KVQMTVRQCIER 213
            |.||....|..     ....::..:||..::.|.||...||||:|....:   |....:..||.:
  Fly   211 NDLGPRRNDGSGEAVFWCSFLAGLAAGSTAALAVNPFDVVKTRLQAIKKADGEKEFKGISDCITK 275

  Fly   214 VYAQGGVAAFYKG------ITASYFGICETMVHFVIYE 245
            .....|..||:||      :.|..|||.:|:.:..:.|
  Fly   276 TLKHEGPTAFFKGGLCRMIVIAPLFGIAQTVYYLGVAE 313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:395101	44/193 (23%)
		Mito_carr	163..253	CDD:395101	25/97 (26%)
		Mito_carr	268..355	CDD:395101
GC1	NP_650134.1	PTZ00169	37..294	CDD:240302	62/265 (23%)