DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and slc25a25a

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_998422.1 Gene:slc25a25a / 406541 ZFINID:ZDB-GENE-040426-2396 Length:469 Species:Danio rerio


Alignment Length:346 Identity:84/346 - (24%)
Similarity:136/346 - (39%) Gaps:83/346 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            ||::||.||.|....|.||:.:|..:|                   .:|.|.             
Zfish   189 HLVSGGGAGAVSRTCTAPLDRLKVLMQ-------------------VHGCQG------------- 221

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                           |||.::..|..:::..|.|:|::|.|.|::.:||
Zfish   222 -------------------------------KSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAP 255

  Fly   141 SRAIYFCTYSQTKNTLNS----LGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNS 201
            ..|:.|..|.|.|..:.|    ||..||      .::.:.||.::.:...|:..:|||:.|....
Zfish   256 ETALKFMAYEQIKRVMGSSQETLGISER------FVAGSLAGVIAQSTIYPMEVLKTRLALRKTG 314

  Fly   202 KVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTKGS 265
            :.: .:..|.:.:....|::|||||...:..||.. ..:...:||.:|:..|    ||:......
Zfish   315 QYK-GISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLKNTWL----QRYGTENAD 374

  Fly   266 RDFLEFMMAGAVSKTIASCIAYPHEVARTRLRE----EGNKYNSFWQTLHTVWKEEGRAGLYRGL 326
            ......:..|.||.|.....:||..:.|||::.    ||:...|.......:.|.||..||||||
Zfish   375 PGVFVLLACGTVSSTCGQLASYPLALIRTRMQAQASVEGSSQVSMTGLFKQIMKTEGPTGLYRGL 439

  Fly   327 ATQLVRQIPNTAIMMATYEAV 347
            ....::.||..:|....||.:
Zfish   440 TPNFLKVIPAVSISYVVYEHI 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 31/144 (22%)
Mito_carr 163..253 CDD:395101 21/90 (23%)
Mito_carr 268..355 CDD:395101 26/84 (31%)
slc25a25aNP_998422.1 FRQ1 40..141 CDD:444056
Solcar 1 184..270 31/143 (22%)
PTZ00169 191..445 CDD:240302 77/327 (24%)
Solcar 2 278..363 23/91 (25%)
Solcar 3 375..463 26/86 (30%)
Blue background indicates that the domain is not in the aligned region.

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