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Protein Alignment Rim2 and sea
DIOPT Version :9
Sequence 1: | NP_608615.1 |
Gene: | Rim2 / 33350 |
FlyBaseID: | FBgn0031359 |
Length: | 365 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001027175.1 |
Gene: | sea / 3772221 |
FlyBaseID: | FBgn0037912 |
Length: | 317 |
Species: | Drosophila melanogaster |
Alignment Length: | 189 |
Identity: | 48/189 - (25%) |
Similarity: | 85/189 - (44%) |
Gaps: | 24/189 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 171 IMSAASAGFVSSTATNPIWFVKTRMQLD-------YNSKVQMTVRQCIERVYAQGGVAAFYKGIT 228
|::....|.:....|.|..:|||::||| ||. :..|:::...:.|....|:|::
Fly 37 IVAGGITGGIEICITYPTEYVKTQLQLDEKGAAKKYNG-----IFDCVKKTVGERGFLGLYRGLS 96
Fly 229 ASYFG-ICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVA 292
...:| |.::...|..:||:||..::.|.| ...|...|..:.||.....:| ..|.|..
Fly 97 VLVYGSIPKSAARFGAFEFLKSNAVDSRGQ----LSNSGKLLCGLGAGVCEAIVA---VTPMETI 154
Fly 293 RTRL---REEGN-KYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAV 347
:.:. :..|| |:..|...:..:.|.||.:|:|:||...:::|..|.||.....|::
Fly 155 KVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQGSNQAIRFFVLESL 213
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45442081 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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