DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and CG18324

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster


Alignment Length:371 Identity:78/371 - (21%)
Similarity:128/371 - (34%) Gaps:97/371 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTTI 77
            :.||:|.....|.|.|::|||||:|.                      |.||      ....|.:
  Fly     7 VLGGTAAMGAVVFTNPIDVVKTRMQL----------------------QGEL------AARGTYV 43

  Fly    78 LRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSR 142
            ...|..|                            |.:..||.|:|..||.|||.|.|.......
  Fly    44 KPYRHLP----------------------------QAMLQIVLNDGLLALEKGLAPALCYQFVLN 80

  Fly   143 AIYFCTYSQTKNTLNSLGFVERDSPLVH----IMSAASAGFVSSTATNPIWFVKTRMQLDYNSKV 203
            ::....||   |.| .||:::.....:.    :...|..|...:...:|.:.:|.:........:
  Fly    81 SVRLSVY
S---NAL-ELGYLQNADGSISFYRGMFFGALGGCTGTYFASPFYMIKAQQHAQAVQSI 141

  Fly   204 QM-------TVRQCIERVYAQGGVAAFYKGITASYFGICETMV--HFVIYEFIKSKLLEQRNQRH 259
            .:       ::...:..:|...|::.|::....|   :..|:|  ...|..|.|:|.|       
  Fly   142 AVGFQHKHTSMMDALLHIYRTNGISGFWRAALPS---LNRTLVASSVQIGTFPKAKSL------- 196

  Fly   260 TDTKG--SRDFLEFMMAGAVSKTIASCIAYPHEVARTRL-------REEGNKYNSFWQTLHTVWK 315
            ...||  :...|....||..|.|:.:....|.:|..||:       :..|..|.........:|:
  Fly   197 LKDKGWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLVDCFTKIWR 261

  Fly   316 EEGRAGLYRGLATQLVRQIPNTAIMMATYEAVV-----YVLTRRFN 356
            .||..|:|:|......|..|:|.:....:|.::     ||.::|.|
  Fly   262 TEGIHGMYKGFWPIYFRSAPHTTLTFVFFEKLLHLRDRYVFSQRRN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 33/142 (23%)
Mito_carr 163..253 CDD:395101 14/102 (14%)
Mito_carr 268..355 CDD:395101 23/98 (23%)
CG18324NP_725361.1 Mito_carr 4..87 CDD:395101 30/135 (22%)
Mito_carr 101..201 CDD:395101 15/109 (14%)
Mito_carr 204..296 CDD:395101 21/91 (23%)

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