DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a40

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_848881.2 Gene:Slc25a40 / 319653 MGIID:2442486 Length:337 Species:Mus musculus


Alignment Length:368 Identity:90/368 - (24%)
Similarity:157/368 - (42%) Gaps:81/368 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AGTVGAVVT----CPLEVVKTRLQSSTAFMTPSRLAENAGGGP---------ANGGQSELLRPEQ 69
            |...|||:|    .||:|||.|||           |:|   .|         :||....:...|:
Mouse    22 ASCTGAVLTSLMVTPLDVVKIRLQ-----------AQN---NPFPKGKCFLYSNGLMDHMCVCEE 72

  Fly    70 RRKLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPN 134
            ..|        ::..:..|..|                  ..:.....|::|||.::|:.||.|.
Mouse    73 ESK--------KAWYKKPGNFR------------------GTLDAFLKILRNEGIKSLWSGLPPT 111

  Fly   135 LVGVAPSRAIYFCTYSQTKNTLNS-LGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLD 198
            ||...|:..|||..|.|....|.: ||..|...|:|   :...|.|.:.|..:|:..::|::|..
Mouse   112 LVMAIPATVIYFTCYEQLSAFLKTKLGENETRIPIV---AGVVARFGAVTVISPLELIRTKVQSK 173

  Fly   199 YNSKVQMTVRQCIERVYAQGGVAAFYKGITASYF-GICETMVHFVIYEFIKSKLLEQRNQRHTDT 262
            ..|..::  .|.:....::.|..:.:||...:.. .:..:.:::..||.:|..|.| ::..:..|
Mouse   174 KFSYKEL--YQFVSMRVSEDGWISLWKGWAPTILRDVPFSAMYWYNYENLKRWLCE-KSGLYEPT 235

  Fly   263 KGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREE--GNKYNSF--------WQTLHTVWKEE 317
                 |:....:||:|.:.|:....|.:|.:|:.:.:  .|:|..|        |..:..:..::
Mouse   236 -----FMINFTSGALSGSFAAVATLPFDVVKTQKQTQLWTNEYCKFPAPLDMSTWTIMKNIVADK 295

  Fly   318 GRAGLYRGLATQLVRQIPNTAIMMATYEAVVYVLTRRFNNKSN 360
            |.:||:.||..:||:.:|..|||:::||     |.:.|..|.|
Mouse   296 GFSGLFTGLIPRLVKIVPACAIMISSYE-----LGKSFFQKQN 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 38/150 (25%)
Mito_carr 163..253 CDD:395101 18/90 (20%)
Mito_carr 268..355 CDD:395101 26/96 (27%)
Slc25a40NP_848881.2 Mito_carr 13..137 CDD:395101 39/154 (25%)
Solcar 1 14..132 38/149 (26%)
Solcar 2 140..224 17/88 (19%)
Mito_carr 146..229 CDD:395101 17/88 (19%)
Mito_carr 232..331 CDD:395101 28/108 (26%)
Solcar 3 234..328 27/103 (26%)

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