Protein Alignment Rim2 and CG5254

DIOPT Version :9

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_569856.2
• Gene: CG5254 / 31020
• FlyBaseID: FBgn0040383
• Length: 306
• Species: Drosophila melanogaster
• Alignment Length: 342
• Identity: 89/342 - (26%)
• Similarity: 145/342 - (42%)
• Gaps: 72/342 - (21%)

  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTT 76
            ::||||||.:...:..||:|||||:|...   ||:..|...|....||
  Fly    18 VLAGGSAGFLEVCIMQPLDVVKTRIQIQA---TPAPNAAALGEVHYNG----------------- 62

  Fly    77 ILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPS 141
                                              :..|...:.::||..:.:||:.|.::...|.
  Fly    63 ----------------------------------VFDCFAKMYRHEGISSYWKGIMPPILAETPK 93

  Fly   142 RAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSKVQMT 206
            |||.|..:.||| .|...| ....:||...::..:||.:.:.|.||...||...|.|...|:..|
  Fly    94 RAIKFLVFEQTK-PLFQFG-SPTPTPLTFSLAGLTAGTLEAIAVNPFEVVKVAQQADRQKKMLST 156

  Fly   207 VRQCIERVYAQG-GVAAFYKGITASY--FGICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDF 268
            .......:...| |.:...|||||:.  .|:. .||:|..|..:|:.:.|.: :.|.      :|
  Fly   157 FAVAKGIIQQDGLGFSGLNKGITATMGRNGVF-NMVYFGFYHSVKNVVPEYK-ESHL------EF 213

  Fly   269 LEFMMAGAVSKTIASCIAYPHEVARTRLR----EEGN-KYNSFWQTLHTVWKEEGRAGLYRGLAT 328
            |..:..|.::.|:|..:..|.:||::|::    ..|. ||.....::..|::|||...||:||..
  Fly   214 LRKVTIGFLAGTLACFVNIPFDVAKSRIQGPQPVPGQIKYRGTLSSMGIVYREEGFRALYKGLVP 278

  Fly   329 QLVRQIPNTAIMMATYE 345
            :::|..|..||::..:|
  Fly   279 KIMRLGPGGAILLLVFE 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:278578	34/143 (24%)
		Mito_carr	163..253	CDD:278578	26/92 (28%)
		Mito_carr	268..355	CDD:278578	25/83 (30%)
CG5254	NP_569856.2	Mito_carr	18..112	CDD:278578	36/149 (24%)
		PTZ00169	19..301	CDD:240302	89/341 (26%)
		Mito_carr	122..207	CDD:278578	25/85 (29%)
		Mito_carr	209..305	CDD:278578	26/93 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45442119
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840