DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a23

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_017451808.1 Gene:Slc25a23 / 301113 RGDID:1588586 Length:544 Species:Rattus norvegicus


Alignment Length:343 Identity:83/343 - (24%)
Similarity:136/343 - (39%) Gaps:83/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTT 76
            |:||..||.|....|.||:.:|..:|                   .:..:|..|           
  Rat   188 LVAGAVAGAVSRTGTAPLDRLKVFMQ-------------------VHASKSNRL----------- 222

  Fly    77 ILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPS 141
                    .::||                         ||::||..|..:|::|.|.|::.:||.
  Rat   223 --------NILGG-------------------------LRNMVQEGGLLSLWRGNGINVLKIAPE 254

  Fly   142 RAIYFCTYSQTKNTL----NSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSK 202
            .||.|..|.|.|..:    .:|...||      .::.:.||..:.|...|:..:|||:.|....:
  Rat   255 SAIKFMAYEQIKRAICGQQETLHVQER------FVAGSLAGATAQTIIYPMEVLKTRLTLRRTGQ 313

  Fly   203 VQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTKGSR 266
            .: .:..|..|:..:.|..|||:|...:..||.. ..:...:||.:|::.|:|    ::....:.
  Rat   314 YK-GLLDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLKNRWLQQ----YSHESANP 373

  Fly   267 DFLEFMMAGAVSKTIASCIAYPHEVARTRLRE----EGNKYNSFWQTLHTVWKEEGRAGLYRGLA 327
            ..|..:..|.:|.|.....:||..:.|||::.    ||....|....|..:..:||..|||||:|
  Rat   374 GILVLLACGTISSTCGQIASYPLALVRTRMQAQASIEGGPQVSMVGLLRHILSQEGVWGLYRGIA 438

  Fly   328 TQLVRQIPNTAIMMATYE 345
            ...::.||..:|....||
  Rat   439 PNFMKVIPAVSISYVVYE 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 32/143 (22%)
Mito_carr 163..253 CDD:395101 22/90 (24%)
Mito_carr 268..355 CDD:395101 26/82 (32%)
Slc25a23XP_017451808.1 FRQ1 8..141 CDD:444056
PTZ00169 189..462 CDD:240302 82/342 (24%)
Blue background indicates that the domain is not in the aligned region.

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