DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a17

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001119741.1 Gene:Slc25a17 / 300083 RGDID:1311498 Length:307 Species:Rattus norvegicus


Alignment Length:361 Identity:85/361 - (23%)
Similarity:138/361 - (38%) Gaps:101/361 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRR 71
            ::|:|.:||.........|..||:..:.|||                             .:::|
  Rat     8 ESLVHAVAGAVGSVTAMTVFFPLDTARLRLQ-----------------------------VDEKR 43

  Fly    72 KLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLV 136
            |..||                     |.              .|..|::.||..|.::|..|.:.
  Rat    44 KSKTT---------------------HA--------------VLLEIIKEEGLLAPYRGWFPVIS 73

  Fly   137 GVAPSRAIYFCTYSQTKNTLNSLGFV----ERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQL 197
            .:..|..:||.|:       |||..|    :|.|....:.....||.|:...|.|:|.|.||::|
  Rat    74 SLCCSNFVYFYTF-------NSLKAVWVKGQRSSTGKDLAIGFVAGVVNVLLTTPLWVVNTRLKL 131

  Fly   198 D----YNSKVQMT----VRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQ 254
            .    .|..:..|    :.....::....|:.|.:.|...|...:....:.|:.||.:|.:||::
  Rat   132 QGAKFRNEDIIPTNYKGIIDAFHQIIRDEGILALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKK 196

  Fly   255 RNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQT---------- 309
            |      ||.|.  |:..:.|||:|.||:.:.||.:..::.||...::.|...:|          
  Rat   197 R------TKLSS--LDVFIIGAVAKAIATTVTYPMQTVQSILRFGRHRLNPENRTLGSLRNVLSL 253

  Fly   310 LHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            ||...|..|..|||:||..:|::.:...|:|...||
  Rat   254 LHQRVKRFGIMGLYKGLEAKLLQTVLTAALMFLVYE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 26/147 (18%)
Mito_carr 163..253 CDD:395101 23/97 (24%)
Mito_carr 268..355 CDD:395101 27/88 (31%)
Slc25a17NP_001119741.1 Mito_carr 10..95 CDD:395101 30/155 (19%)
Mito_carr 97..197 CDD:395101 24/99 (24%)
Mito_carr 199..291 CDD:395101 29/93 (31%)

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