DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a25

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001418431.1 Gene:Slc25a25 / 246771 RGDID:628666 Length:514 Species:Rattus norvegicus


Alignment Length:346 Identity:82/346 - (23%)
Similarity:145/346 - (41%) Gaps:87/346 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            ||:|||.||.|....|.||:.:|..:|                                      
  Rat   234 HLVAGGGAGAVSRTCTAPLDRLKVLMQ-------------------------------------- 260

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                     :.::...:|.|:.....:::..|.::|::|.|.|::.:||
  Rat   261 -------------------------VHASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAP 300

  Fly   141 SRAIYFCTYSQTKNTLNSLGFVERDSPLVH--IMSAASAGFVSSTATNPIWFVKTRMQL----DY 199
            ..||.|..|.|.|..:.|    ::::..:|  :::.:.||.::.::..|:..:||||.|    .|
  Rat   301 ESAIKFMAYEQMKRLVGS----DQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQY 361

  Fly   200 NSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTK 263
            :..:     .|.:|:.|:.||||||||...:..||.. ..:...:||.:|:..|    ||:....
  Rat   362 SGML-----DCAKRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWL----QRYAVNS 417

  Fly   264 GSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKE----EGRAGLYR 324
            ........:..|.:|.|.....:||..:.|||::.:.:...:...|:.:::|:    ||..||||
  Rat   418 ADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKQILRTEGAFGLYR 482

  Fly   325 GLATQLVRQIPNTAIMMATYE 345
            |||...::.||..:|....||
  Rat   483 GLAPNFMKVIPAVSISYVVYE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 28/144 (19%)
Mito_carr 163..253 CDD:395101 26/96 (27%)
Mito_carr 268..355 CDD:395101 24/82 (29%)
Slc25a25NP_001418431.1 FRQ1 48..188 CDD:444056
PTZ00169 236..490 CDD:240302 75/329 (23%)
Blue background indicates that the domain is not in the aligned region.

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