DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and Slc25a25

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_666230.2 Gene:Slc25a25 / 227731 MGIID:1915913 Length:514 Species:Mus musculus


Alignment Length:346 Identity:83/346 - (23%)
Similarity:144/346 - (41%) Gaps:87/346 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            ||:|||.||.|....|.||:.:|..:|                                      
Mouse   234 HLVAGGGAGAVSRTCTAPLDRLKVLMQ-------------------------------------- 260

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                     :.::...:|.||.....:::..|.::|::|.|.|::.:||
Mouse   261 -------------------------VHASRSNNMCIVGGFTQMIREGGAKSLWRGNGINVLKIAP 300

  Fly   141 SRAIYFCTYSQTKNTLNSLGFVERDSPLVH--IMSAASAGFVSSTATNPIWFVKTRMQL----DY 199
            ..||.|..|.|.|..:.|    ::::..:|  :::.:.||.::.::..|:..:||||.|    .|
Mouse   301 ESAIKFMAYEQMKRLVGS----DQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKTGQY 361

  Fly   200 NSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTK 263
            :..:     .|..|:.|:.||||||||...:..||.. ..:...:||.:|:..|    ||:....
Mouse   362 SGML-----DCARRILAKEGVAAFYKGYIPNMLGIIPYAGIDLAVYETLKNTWL----QRYAVNS 417

  Fly   264 GSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKE----EGRAGLYR 324
            ........:..|.:|.|.....:||..:.|||::.:.:...:...|:.:::|:    ||..||||
Mouse   418 ADPGVFVLLACGTISSTCGQLASYPLALVRTRMQAQASIEGAPEVTMSSLFKQILRTEGAFGLYR 482

  Fly   325 GLATQLVRQIPNTAIMMATYE 345
            |||...::.||..:|....||
Mouse   483 GLAPNFMKVIPAVSISYVVYE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 29/144 (20%)
Mito_carr 163..253 CDD:395101 26/96 (27%)
Mito_carr 268..355 CDD:395101 24/82 (29%)
Slc25a25NP_666230.2 FRQ1 48..188 CDD:444056
PTZ00169 236..490 CDD:240302 76/329 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.