DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a36

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_006510933.1 Gene:Slc25a36 / 192287 MGIID:1924909 Length:350 Species:Mus musculus


Alignment Length:340 Identity:170/340 - (50%)
Similarity:209/340 - (61%) Gaps:54/340 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTTILRNRSQ 83
            |||||::||||||||||||||:..:..|.:..|...|                            
Mouse    56 GTVGAILTCPLEVVKTRLQSSSVTLYISEVQLNTMAG---------------------------- 92

  Fly    84 PQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCT 148
                ..|.|::             |...:.||:.|::.||||:||:|||||||||||||||||..
Mouse    93 ----ASVNRVV-------------SPGPLHCLKAILEKEGPRSLFRGLGPNLVGVAPSRAIYFAA 140

  Fly   149 YSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSK--VQMTVRQCI 211
            ||..|..||  |..:.||..||:.|||.|||.:.|||||||.:|||:|||..::  .||...:|:
Mouse   141 YSNCKEKLN--G
VFDPDSTQVHMASAAMAGFTAITATNPIWLIKTRLQLDARTRGEKQMGAFECV 203

  Fly   212 ERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQRHTDT-----KGSRDFLEF 271
            .:||...|:..||:|::|||.||.||::||||||.||.||||.:.....:|     |.:.||:..
Mouse   204 RKVYQTDGLRGFYRGMSASYAGISETVIHFVIYESIKQKLLE
CKTASMMETDEESVKEASDFVRM 268

  Fly   272 MMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPN 336
            |:|.|.|||.|:.|||||||.||||||||.||.||:|||..:.:|||...|||||.|.|||||||
Mouse   269 MLAAATSKTCATTIAYPHEVVRTRLREEGTKYRSFFQTLSLIVQEEGYGSLYRGLTTHLVRQIPN 333

  Fly   337 TAIMMATYEAVVYVL 351
            |||||||||.|||:|
Mouse   334 TAIMMATYELVVYLL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 54/136 (40%)
Mito_carr 163..253 CDD:278578 49/91 (54%)
Mito_carr 268..355 CDD:278578 59/84 (70%)
Slc25a36XP_006510933.1 Mito_carr 54..150 CDD:365909 56/140 (40%)
Mito_carr 156..245 CDD:365909 48/88 (55%)
Mito_carr 265..350 CDD:365909 59/84 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5794
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10039
Inparanoid 1 1.050 316 1.000 Inparanoid score I2531
Isobase 1 0.950 - 0 Normalized mean entropy S1076
OMA 1 1.010 - - QHG53601
OrthoDB 1 1.010 - - D1372287at2759
OrthoFinder 1 1.000 - - FOG0002320
OrthoInspector 1 1.000 - - otm42519
orthoMCL 1 0.900 - - OOG6_103444
Panther 1 1.100 - - O PTHR45829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1930
SonicParanoid 1 1.000 - - X1747
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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