DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and slc-25A32

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_495746.1 Gene:slc-25A32 / 186841 WormBaseID:WBGene00010459 Length:296 Species:Caenorhabditis elegans


Alignment Length:343 Identity:87/343 - (25%)
Similarity:134/343 - (39%) Gaps:73/343 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            |||.|...|....||..|.:::|.|..                   ||.|               
 Worm    11 HLIGGLCGGVTSTVVCHPFDLLKIRFS-------------------ANEG--------------- 41

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                      ||..|:..|....:|.||:.||.|.|::|..|:|:|.:.
 Worm    42 --------------------------SSLRPQYSSYADAVRKIVRVEGVRGLYQGWTPSLIGASL 80

  Fly   141 SRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDY---NSK 202
            |..:||..|:..:..:.. .|........:::|...:|......|||||..|||:.|.|   .||
 Worm    81 SWGLYFQWYNSLRTKIYE-NFSTGSKLANNLISGCISGSAIMCITNPIWLTKTRLCLQYENQQSK 144

  Fly   203 VQMTVRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRD 267
            ....:..|:::...|.|....|:|......|.....|....|.:|    :::|.|.....|.|  
 Worm   145 KYAGMMDCLKKTVKQEGFFGLYRGFVTGVIGTTHGAVQIAAYSWI----IDKRCQSQGLPKDS-- 203

  Fly   268 FL---EFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQTLHTVWKEEGRAGLYRGLATQ 329
            ||   ::::|.:.||.:|:.|.:|::|.|||:::........|:|.......||..||::|....
 Worm   204 FLSQTDYVIASSTSKVLATTITFPYQVLRTRMQDHNTDSRGVWKTTLKTIHNEGIGGLWKGCLIA 268

  Fly   330 LVRQIPNTAIMMATYEAV 347
            .|||:|...:...|||.|
 Worm   269 NVRQLPAAVVTFLTYENV 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 32/144 (22%)
Mito_carr 163..253 CDD:395101 23/92 (25%)
Mito_carr 268..355 CDD:395101 27/83 (33%)
slc-25A32NP_495746.1 Mito_carr 5..100 CDD:395101 32/149 (21%)
Mito_carr 104..189 CDD:395101 22/84 (26%)
Mito_carr 210..289 CDD:395101 25/77 (32%)

Return to query results.
Submit another query.