Protein Alignment Rim2 and F55A11.4

DIOPT Version :10

• Sequence 1: NP_608615.1
• Gene: Rim2 / 33350
• FlyBaseID: FBgn0031359
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_001256365.1
• Gene: F55A11.4 / 186276
• WormBaseID: WBGene00010077
• Length: 535
• Species: Caenorhabditis elegans
• Alignment Length: 344
• Identity: 78/344 - (22%)
• Similarity: 132/344 - (38%)
• Gaps: 75/344 - (21%)

  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            ||:|||:||.|....|.|.:.:|..||
 Worm   251 HLVAGGAAGAVSRTCTAPFDRIKVYLQ-------------------------------------- 277

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                     ::|:....:.::.||:.:....|.::.::|.|.|::.:||
 Worm   278 -------------------------VNSSKTNRLGVMSCLKLLHAEGGIKSFWRGNGINVIKIAP 317

  Fly   141 SRAIYFCTYSQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSKVQM 205
            ..||.|..|.|.|..:......|..|....:.:.::||.:|.:...|:..:|||:.|....::..
 Worm   318 ESAIKFMCYDQLKRLIQKKKGNEEISTFERLCAGSAAGAISQSTIYPMEVMKTRLALRKTGQLDR 382

  Fly   206 TVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHTDTKGSR-DF 268
            .:.....::|.:.|:..||||...:..||.. ..:...|||.:|...:     |:.:|..|. ..
 Worm   383 GIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYV-----RYYETNSSEPGV 442

  Fly   269 LEFMMAGAVSKTIASCIAYPHEVARTRLREEG-NKYNSFWQTLHTVWK----EEGRAGLYRGLAT 328
            |..:..|..|.|.....:||..:.||||:... .:|:....|:...:|    .||..|.|||:..
 Worm   443 LALLACGTCSSTCGQLSSYPFALVRTRLQALSITRYSPQPDTMFGQFKYILQNEGVTGFYRGITP 507

  Fly   329 QLVRQIPNTAIMMATYEAV 347
            ..::.||..:|....||.|
 Worm   508 NFLKVIPAVSISYVVYEKV 526

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rim2	NP_608615.1	Mito_carr	8..156	CDD:395101	28/144 (19%)
		Mito_carr	163..253	CDD:395101	22/90 (24%)
		Mito_carr	268..355	CDD:395101	25/85 (29%)
F55A11.4	NP_001256365.1	FRQ1	72..212	CDD:444056
		PTZ00169	253..511	CDD:240302	70/325 (22%)