DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and T09F3.2

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_496236.1 Gene:T09F3.2 / 174602 WormBaseID:WBGene00011662 Length:384 Species:Caenorhabditis elegans


Alignment Length:385 Identity:160/385 - (41%)
Similarity:214/385 - (55%) Gaps:49/385 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAG------------------ 53
            :..||.|.|...||.|..:||||||||||:|||......|..:.::|                  
 Worm     6 EAAIHFIGGAVGGTTGTAITCPLEVVKTRMQSSRGLDAQSGPSTSSGSNSSKSSTSSSSTKSNGI 70

  Fly    54 -----------GGPANGGQSELLR---PEQRRKLSTTILRNRSQ-PQVIGGVRRIMAISHCGISS 103
                       |....|||..|.|   ......||...|.|:.| |.....|:  ..:.:...||
 Worm    71 FKSVVSQRNGFGSNFRGGQLALERIFNNGSLAALSKANLFNQFQNPSTTSLVQ--YCVRNLSTSS 133

  Fly   104 TTP-------KSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCTYSQTKNTLNSLGF 161
            |.|       :...:::.:..:::.||..||:|||.|||||||||:|:||.|||.:|...|....
 Worm   134 TPPQPPTAARRGTIVIKYITQVIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRFWNESEV 198

  Fly   162 VERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLDYNSKVQMTVRQCIERVYAQGGVAAFYKG 226
            :..:|.:||::||.|||||:::|.||||.||||:||...   .:.:.|.|:|||.:.|...||||
 Worm   199 LIPNSAIVHMVSAGSAGFVAASAVNPIWLVKTRLQLHQG---HIGIWQMIKRVYHREGFKGFYKG 260

  Fly   227 ITASYFGICETMVHFVIYEFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEV 291
            :||||.|:.|||:.|.|||:.:..||...|:.   .|...|||.||:||..:|.||..:||||||
 Worm   261 VTASYAGVSETMIQFCIYEYFRGVLLSDANEM---DKRKMDFLNFMVAGGSAKFIACVVAYPHEV 322

  Fly   292 ARTRLREEGNKYNSFWQTLHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            .|||||||..|...|::||:.::| ||...:||||:.||:|.:|||||.|.|||.|||:|
 Worm   323 VRTRLREETGKSRGFFKTLYQLYK-EGYPAMYRGLSVQLMRTVPNTAITMGTYEFVVYML 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 62/187 (33%)
Mito_carr 163..253 CDD:278578 44/89 (49%)
Mito_carr 268..355 CDD:278578 49/84 (58%)
T09F3.2NP_496236.1 Mito_carr <137..196 CDD:278578 24/58 (41%)
Mito_carr 201..288 CDD:278578 45/89 (51%)
Mito_carr 299..377 CDD:278578 45/78 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167018
Domainoid 1 1.000 98 1.000 Domainoid score I4517
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10039
Inparanoid 1 1.050 259 1.000 Inparanoid score I1926
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53601
OrthoDB 1 1.010 - - D1372287at2759
OrthoFinder 1 1.000 - - FOG0002320
OrthoInspector 1 1.000 - - oto18082
orthoMCL 1 0.900 - - OOG6_103444
Panther 1 1.100 - - LDO PTHR45829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1930
SonicParanoid 1 1.000 - - X1747
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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