DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and SCaMC

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_061508926.1 Gene:SCaMC / 1277102 VectorBaseID:AGAMI1_003564 Length:578 Species:Anopheles gambiae


Alignment Length:360 Identity:89/360 - (24%)
Similarity:138/360 - (38%) Gaps:112/360 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLST 75
            ||.|||.||.|....|.||:.:|..||...:                          :||     
Mosquito   295 HLAAGGIAGAVSRTCTAPLDRLKVFLQVQAS--------------------------KQR----- 328

  Fly    76 TILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAP 140
                                               |..||:::::..|.|:|::|...|::.:||
Mosquito   329 -----------------------------------ISDCLQYMLKEGGVRSLWRGNFINVLKIAP 358

  Fly   141 SRAIYFCTYSQTK-----NTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQL--- 197
            ..||.|..|.|.|     |....:...||      .::.|.||.||.||..|:..:|||:.|   
Mosquito   359 ESAIKFAAYEQVKRLIRGNDKRQMTIYER------FVAGACAGGVSQTAIYPMEVLKTRLALRKT 417

  Fly   198 -DYNSKVQMTVRQCIERVYAQGGVAAFYKGITASYFGICE-TMVHFVIYEFIKSKLLEQRNQRHT 260
             :|:|     :.....::|.:.|:.:||:|...:..||.. ..:...:||.:|.|.|.     |.
Mosquito   418 GEYSS-----ILDAASKIYRREGLRSFYRGYIPNMLGIIPYAGIDLAVYETLKKKYLS-----HH 472

  Fly   261 DTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLRE---------------EGNKYNSFWQTL 310
            :|: ...|...:..|:.|.|:....:||..:.||||:.               |.|..|.|.:.:
Mosquito   473 ETE-QPSFWLLLACGSASSTLGQVCSYPLALVRTRLQAQAVTIGPNPDGSVAVEPNMTNVFKRII 536

  Fly   311 HTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            .|    ||..|||||:....::.:|..:|....||
Mosquito   537 QT----EGPVGLYRGITPNFIKVLPAVSISYVVYE 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 33/149 (22%)
Mito_carr 163..253 CDD:395101 27/94 (29%)
Mito_carr 268..355 CDD:395101 26/93 (28%)
SCaMCXP_061508926.1 None

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