DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and Slc25a20

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_446417.2 Gene:Slc25a20 / 117035 RGDID:621443 Length:301 Species:Rattus norvegicus


Alignment Length:355 Identity:79/355 - (22%)
Similarity:134/355 - (37%) Gaps:83/355 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKL 73
            |.:|:|||..|.....|..||:.||.|||:.     |..|.                        
  Rat    11 LKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQ-----PPSLP------------------------ 46

  Fly    74 STTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGV 138
                    .||.:..|.                     :.|.|..:..||...|::|:...::||
  Rat    47 --------GQPPMYSGT---------------------IDCFRKTLFREGITGLYRGMAAPIIGV 82

  Fly   139 APSRAIYFCTYSQTKNTLNSLGFVERDSPLVHIM--SAASAGFVSSTATNPIWF----VKTRMQL 197
            .|..|:.|..:...|.       :::.||...:.  ...:||.:|...|..|..    :|..:|:
  Rat    83 TPMFAVCFFGFGLGKR-------LQQKSPEDELTYPQLFTAGMLSGVFTTGIMTPGERIKCLLQI 140

  Fly   198 DYNS---KVQMTVRQCIERVYAQGGVAAFYKGITASYF-GICETMVHFVIYEFIKSKLLEQRNQR 258
            ..:|   |...|: .|.:::|.:.|:..||||...:.. .:..:.::|:.||::|:....|....
  Rat   141 QASSGKNKYSGTL-DCAKKLYQEFGIRGFYKGTVLTLMRDVPASGMYFMTYEWLKNLFTPQGKSV 204

  Fly   259 HTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLR--EEGNKYNSFWQTLHTVWKEEGRAG 321
            | |....|    .::||..:......:|.|.:|.::|.:  ..|...|.|...|..:.:|||...
  Rat   205 H-DLSVPR----VLVAGGFAGIFNWVVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIREEGVTS 264

  Fly   322 LYRGLATQLVRQIPNTAIMMATYEAVVYVL 351
            ||:|....::|..|..|.....:|..:.:|
  Rat   265 LYKGFNAVMIRAFPANAACFLGFEIAMKIL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 31/146 (21%)
Mito_carr 163..253 CDD:395101 23/99 (23%)
Mito_carr 268..355 CDD:395101 21/86 (24%)
Slc25a20NP_446417.2 Mito_carr 6..103 CDD:395101 31/156 (20%)
Solcar 1 8..99 31/152 (20%)
Mito_carr 106..198 CDD:395101 21/92 (23%)
Solcar 2 108..196 21/88 (24%)
Mito_carr 206..294 CDD:395101 22/91 (24%)
Solcar 3 207..293 21/89 (24%)

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