DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rim2 and Slc25a45

DIOPT Version :10

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_598915.1 Gene:Slc25a45 / 107375 MGIID:2147731 Length:288 Species:Mus musculus


Alignment Length:302 Identity:66/302 - (21%)
Similarity:111/302 - (36%) Gaps:92/302 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IAGGSAGTVGAVVTCPLEVVKTRLQSSTAF----------------------------------- 42
            :||..:|.||.|:..|.:.||.|||:.:.:                                   
Mouse     7 VAGWISGAVGLVLGHPFDTVKVRLQTQSTYQGIVDCVVKTYRHESVLGFFKGMSFPIASVALVNS 71

  Fly    43 ------------MTPSRLAENAGGGPA---------NGG--QSELLRPEQRRKLSTTILRNRSQP 84
                        :|.:...|.....|:         .||  |:..|.|....|:.   |:|:::|
Mouse    72 VLFGVYSNTLLALTATSHQERRAQPPSYTNIFIAGCTGGLLQAYCLAPFDLIKVR---LQNQTEP 133

  Fly    85 QVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAIYFCTY 149
            ::             .|||:.|:....|.|...|::.|||:.||:|....::...|:..:||.||
Mouse   134 RM-------------QISSSMPRYRGPVHCAASILREEGPQGLFRGSWALVLRDTPTLGMYFVTY 185

  Fly   150 SQTKNTLNSLGFVERDSPLVHIMSAASAGFVSSTATNPIWFVKTRMQLD------YNSKVQMTVR 208
            ..........|  :..|....:::...||..|.....|...:|:|||:|      |...:     
Mouse   186 EGLCRQ
YTPEG--QNPSSATVLVAGGFAGIASWITATPFDVIKSRMQMDGLKGRKYGGML----- 243

  Fly   209 QCIERVYAQGGVAAFYKGIT---ASYFGICETMVHFVIYEFI 247
            .|:...:.|.|:..|:||:|   |..|.:  ....|:.||::
Mouse   244 DCMASSFRQEGIGVFFKGMTLNSARAFPV--NAATFLSYEYL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:395101 42/200 (21%)
Mito_carr 163..253 CDD:395101 23/94 (24%)
Mito_carr 268..355 CDD:395101
Slc25a45NP_598915.1 Solcar 1 1..83 12/75 (16%)
Mito_carr 2..77 CDD:395101 12/69 (17%)
Mito_carr 95..186 CDD:395101 27/106 (25%)
Solcar 2 97..191 28/109 (26%)
Mito_carr 197..288 CDD:395101 23/94 (24%)
Solcar 3 199..286 23/92 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.