DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rim2 and SLC25A17

DIOPT Version :9

Sequence 1:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_006349.1 Gene:SLC25A17 / 10478 HGNCID:10987 Length:307 Species:Homo sapiens


Alignment Length:372 Identity:80/372 - (21%)
Similarity:138/372 - (37%) Gaps:123/372 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DTLIHLIAGGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRR 71
            ::|:|.:||.........|..||:..:.|||                             .:::|
Human     8 ESLVHAVAGAVGSVTAMTVFFPLDTARLRLQ-----------------------------VDEKR 43

  Fly    72 KLSTTILRNRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLV 136
            |..||.:                                   .|..|::.||..|.::|..|.:.
Human    44 KSKTTHM-----------------------------------VLLEIIKEEGLLAPYRGWFPVIS 73

  Fly   137 GVAPSRAIYFCTYSQTKNTLNSL---------------GFVERDSPLVHIMSAASAGFVSSTATN 186
            .:..|..:||.|:    |:|.:|               |||              ||.|:...|.
Human    74 SLCCSNFVYFYTF----NSLKALWVKGQHSTTGKDLVVGFV--------------AGVVNVLLTT 120

  Fly   187 PIWFVKTRMQLD----YNSKVQMT----VRQCIERVYAQGGVAAFYKGITASYFGICETMVHFVI 243
            |:|.|.||::|.    .|..:..|    :.....::....|::|.:.|...|...:....:.|:.
Human   121 PLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMF 185

  Fly   244 YEFIKSKLLEQRNQRHTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRLREEGNKYNSFWQ 308
            ||.:|.:||::|.:..:        |:..:.|||:|.||:.:.||.:..::.||...::.|...:
Human   186 YEGLKRQLLKKRMKLSS--------LDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENR 242

  Fly   309 T----------LHTVWKEEGRAGLYRGLATQLVRQIPNTAIMMATYE 345
            |          ||...:..|..|||:||..:|::.:...|:|...||
Human   243 TLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 26/147 (18%)
Mito_carr 163..253 CDD:278578 21/97 (22%)
Mito_carr 268..355 CDD:278578 26/88 (30%)
SLC25A17NP_006349.1 Necessary for targeting to peroxisomes and interaction with PEX19 1..147 43/220 (20%)
Mito_carr 10..95 CDD:278578 28/152 (18%)
Mito_carr 97..197 CDD:278578 25/113 (22%)
Solcar 2 99..192 23/106 (22%)
Peroxisome localization signal 190..199 4/8 (50%)
Mito_carr 199..291 CDD:278578 26/99 (26%)
Solcar 3 200..294 26/98 (27%)
Necessary for targeting to peroxisomes and interaction with PEX19 244..307 13/46 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53601
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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