DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL48 and MRPL48

DIOPT Version :9

Sequence 1:NP_001259878.1 Gene:mRpL48 / 33348 FlyBaseID:FBgn0031357 Length:181 Species:Drosophila melanogaster
Sequence 2:NP_001305428.1 Gene:MRPL48 / 51642 HGNCID:16653 Length:253 Species:Homo sapiens


Alignment Length:187 Identity:50/187 - (26%)
Similarity:88/187 - (47%) Gaps:32/187 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PKATTTAVRSTSG----SVYEP----------DYLESLKPKFP------------------QYES 48
            |.|:.:.|...:|    |:..|          .|...:|.:.|                  :|..
Human    67 PPASASGVAGITGGILLSISRPYKTKPTHGIGKYKHLIKAEEPKKKKGKVEVRAINLGTDYEYGV 131

  Fly    49 LNVQIKGYDYPQLESYQRFLHGLAEYLDLDVSDCYALPPQKTTVQRLRPNSTVIESEYKLTTYER 113
            ||:.:..||....|||.:::|.|...|.:.|.:.||:|.:...|.:|:...:.:..:..|||:||
Human   132 LNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHER 196

  Fly   114 NLQLNNVDAPVYPQFLRLAQAALPEGVSLQVQEYTDDCEERRYVPDKELLDLKDELE 170
            .:|::.:.|.....||.:.|::|||||.|.|:|:|::..:.|:....||.:|..:|:
Human   197 VVQISGLSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEELLAKLK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL48NP_001259878.1 Ribosomal_S10 50..144 CDD:278753 31/93 (33%)
MRPL48NP_001305428.1 Ribosomal_S10 133..227 CDD:278753 31/93 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159283
Domainoid 1 1.000 62 1.000 Domainoid score I10418
eggNOG 1 0.900 - - E1_KOG4060
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 78 1.000 Inparanoid score I5253
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522619at2759
OrthoFinder 1 1.000 - - FOG0007045
OrthoInspector 1 1.000 - - oto90586
orthoMCL 1 0.900 - - OOG6_108750
Panther 1 1.100 - - LDO PTHR13473
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3521
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.790

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