DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17660 and Tmem87a

DIOPT Version :9

Sequence 1:NP_608612.3 Gene:CG17660 / 33347 FlyBaseID:FBgn0031356 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_038962449.1 Gene:Tmem87a / 366170 RGDID:1309417 Length:560 Species:Rattus norvegicus


Alignment Length:521 Identity:218/521 - (41%)
Similarity:301/521 - (57%) Gaps:54/521 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LLANTKIYAQIKG--CTSNVESNLTITFRLTEHPCI-----FDDRTLQAIAQNATLQKN-----A 99
            |..||.|..:..|  |    :.:|.||:.|....|.     |....::...:|...:|.     .
  Rat    63 LFRNTTIVLKFDGEPC----DQSLNITWFLKSADCYNEVYNFKADEVETYLENLKEKKGLSGRYQ 123

  Fly   100 TINNVITEITRTYPCNGLIVLAINKDKVVEGS---AIPTPEPKHPMLEHKHPLSPTTNPIA---- 157
            |.:.|....:..|           |.:...|.   .:|....|....|:...|:.|.:.||    
  Rat   124 TSSKVFQNCSELY-----------KAQSFSGDLMHRLPLLGEKQEAKENATNLTFTGDKIAMHEP 177

  Fly   158 -SVKEDGIYEIEVNIAAGPSAQ----------FSAVVHIEFLGPHGFISAIDWPFLPFYLIMCIV 211
             ...:|..|...|::....|.:          |:..|.::  ||:.:::..|:|.:.|:::||||
  Rat   178 LQTWQDAPYIFIVHVGISSSKESPKENALSNLFTMTVEVK--GPYEYLTLEDYPLMIFFMVMCIV 240

  Fly   212 YVIFGIIWLFVSFAQWRDLLRIQFWIGGVILLGMLEKAFFYAEYQTLTNKGVAVQHAELVAEFVS 276
            ||:||::||..|...||||||||||||.||.|||.|||.||||:|.:..||.:||:|.::||.:|
  Rat   241 YVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFEKAVFYAEFQNIRYKGESVQNALVLAELLS 305

  Fly   277 CAKRTLARMLVIIMSLGFGIVKPRLGPMLHRVVGVGTLYFVLACVESYLRITNVKTDRSELLVAS 341
            ..||:|||.||||:|||:||||||||..||:||..|.||.:.:.:|..||:|.. ...|..|:.|
  Rat   306 AVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGY-FSYSLALIVS 369

  Fly   342 IPLAVLDTGICWWIFTSLVQTTRTLRLRRNMVKLSLYRHFTNTLIFAVIASVIFMLFALRLRRVE 406
            :.|:.:|..|..|||.||.||.:.|:||||:||||||||||||||.||.||::|:::.....|:.
  Rat   370 LALSAIDACIILWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIV 434

  Fly   407 NCTPGWRDIWVDTGFWHILFSVLLLVIMILWRPTNNNQRYAFTPLLDNPEDEDDEDEEDQFVADA 471
            .|...||::|||...|.:|||::|.||||||||:.||||:||:||  :.|||:||.:|.......
  Rat   435 TCQSDWRELWVDDAIWRLLFSMILFVIMILWRPSANNQRFAFSPL--SEEDEEDEQKEPMLKESF 497

  Fly   472 YGVKMRGQNGTPKTSTTSRNATTTEEDDLRWVEENIPSSMADSALP-ILDSDEEIINTKFEVSKM 535
            .|:|||.....|..::   .|..|:||||:|||||:|||:.|.||| :||||||.:.|.||.|||
  Rat   498 EGMKMRSTKQEPNGNS---KANKTQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKM 559

  Fly   536 Q 536
            :
  Rat   560 E 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17660NP_608612.3 Lung_7-TM_R 160..444 CDD:284280 144/293 (49%)
Tmem87aXP_038962449.1 Lung_7-TM_R 186..472 CDD:369089 143/288 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337141
Domainoid 1 1.000 313 1.000 Domainoid score I1258
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1448608at2759
OrthoFinder 1 1.000 - - FOG0001340
OrthoInspector 1 1.000 - - otm46145
orthoMCL 1 0.900 - - OOG6_101701
Panther 1 1.100 - - O PTHR21229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1432
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.850

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