DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17660 and C52B9.4

DIOPT Version :9

Sequence 1:NP_608612.3 Gene:CG17660 / 33347 FlyBaseID:FBgn0031356 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_508729.2 Gene:C52B9.4 / 180699 WormBaseID:WBGene00016867 Length:558 Species:Caenorhabditis elegans


Alignment Length:581 Identity:218/581 - (37%)
Similarity:326/581 - (56%) Gaps:75/581 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SATLLVVALALLLGPASTAGKSDPGMVDVLVTTDLPSIREQR------PLLANTKIYAQIK-GCT 61
            :.|||   |||:...||..  ..||     :.|::..|::.:      |..|......|:: .|.
 Worm     3 TVTLL---LALISHVASNL--LMPG-----IYTEVVEIQQGKYQLIGVPQAALNGTVVQLEFTCD 57

  Fly    62 SNVESNLTITFRLTEHPC---IFDDRTLQAIAQNATLQKNATINNVITEITRTYPCNGLIVLAIN 123
            ..||......|.|...||   .|:.:..:. .||.....|.|..|.|.:   |:..|.::...  
 Worm    58 PEVELEFDTEFVLRSSPCDKEFFNTKENER-RQNLVFYFNETNQNHIPD---TFDYNEIVYYK-- 116

  Fly   124 KDKVVEGSAIPT------------PEPKHPMLEHKHPLSP-------------TTNPIASVKEDG 163
                   |.:.|            |.|..||...:  ::|             :.:|..|:..||
 Worm   117 -------SPVQTISCKGSHGRFLFPNPTGPMAVKQ--VTPVHVDRVKRDAGLGSFHPAQSIPRDG 172

  Fly   164 IYEIEVNIA-----AGPSAQFSAVVHIEFLGPHGFISAIDWPFLPFYLIMCIVYVIFGIIWLFVS 223
            ||.:.:.:.     :.|::..:..:.:::..|:|::||||||.|.||.|||:.|....:||::..
 Worm   173 IYYMIIKVVGKSFPSSPNSNTNVTISVQWKAPYGYLSAIDWPLLRFYKIMCVFYSALALIWVYCC 237

  Fly   224 FAQWRDLLRIQFWIGGVILLGMLEKAFFYAEYQTLTNKGVAVQHAELVAEFVSCAKRTLARMLVI 288
            ...:||:||||:||||||:|||:|||||.:||.|:.:.|.::.....|||.|||||:|::|:|||
 Worm   238 IKYYRDILRIQYWIGGVIVLGMVEKAFFLSEYATMNDTGSSIDGILEVAEIVSCAKKTMSRVLVI 302

  Fly   289 IMSLGFGIVKPRLGPMLHRVVGVGTLYFVLACVESYLRIT--NVKTDRSELLVASIPLAVLDTGI 351
            |:.:|:|:||||||..|::|.|||.:||:...:|...|::  .|:..|.:.. |::||.:.:..|
 Worm   303 IVCVGYGVVKPRLGQTLNQVAGVGLVYFIFCSIEGIARVSKNTVEATRQKQF-AALPLVLTEMII 366

  Fly   352 CWWIFTSLVQTTRTLRLRRNMVKLSLYRHFTNTLIFAVIASVIFMLFALRLRRVENCTPGWRDIW 416
            .:||||||..|.|.|||:||.:||::||||.|||.|:|||||||||:::.......|...|:::|
 Worm   367 FYWIFTSLASTIRMLRLKRNDIKLNVYRHFANTLAFSVIASVIFMLWSMIYHIFPTCRVDWKELW 431

  Fly   417 VDTGFWHILFSVLLLVIMILWRPTNNNQRYAFTPLLDNPEDEDDEDEEDQFVADAYGVKMRGQNG 481
            |||.|||:||..:|:||||||||:.||||||||||||:.|||:|:||.....|..|.:.....:|
 Worm   432 VDTAFWHVLFCFILVVIMILWRPSQNNQRYAFTPLLDDSEDENDQDEIFNAFAPGYDILTARTSG 496

  Fly   482 TPKTSTTSRNATTTEE-------DDLRWVEENIPSSMADSALPILDSDEEIINTKFEVSKM 535
            :...:...|.|...:|       :||:|:|||||:::||:.:..||.:||..:.:.|||||
 Worm   497 SGAETRKLREAEKEQERKDEAIKEDLKWIEENIPTTLADTLIGGLDDNEEFESKQLEVSKM 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17660NP_608612.3 Lung_7-TM_R 160..444 CDD:284280 136/290 (47%)
C52B9.4NP_508729.2 Lung_7-TM_R 169..459 CDD:284280 136/290 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 297 1.000 Domainoid score I786
eggNOG 1 0.900 - - E1_KOG2568
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69513
Inparanoid 1 1.050 371 1.000 Inparanoid score I1224
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51924
OrthoDB 1 1.010 - - D1448608at2759
OrthoFinder 1 1.000 - - FOG0001340
OrthoInspector 1 1.000 - - oto19637
orthoMCL 1 0.900 - - OOG6_101701
Panther 1 1.100 - - LDO PTHR21229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1798
SonicParanoid 1 1.000 - - X1432
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.870

Return to query results.
Submit another query.