DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpb and CPB

DIOPT Version :9

Sequence 1:NP_001259877.1 Gene:cpb / 33346 FlyBaseID:FBgn0011570 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_177324.2 Gene:CPB / 843509 AraportID:AT1G71790 Length:256 Species:Arabidopsis thaliana


Alignment Length:257 Identity:130/257 - (50%)
Similarity:172/257 - (66%) Gaps:14/257 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYNRDGDS 70
            |:.||.|:||:||:|.|..|..|:.|.|....||||.||.||::.:|.|.|||::||:||||.||
plant     1 MEAALGLLRRMPPKQSETALSALLSLIPQHSSDLLSQVDLPLQVLRDIESGKDFILCEYNRDADS 65

  Fly    71 YRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLDH-GFAAVILI 134
            |||||||.|.|||||...||..|||||:|||..|..||:.|||||:||||:|:.|: ||.|..||
plant    66 YRSPWSNKYLPPLEDALYPSSELRKLEVEANDIFAIYRDQYYEGGISSVYMWEDDNEGFVACFLI 130

  Fly   135 KKAGDGSKM---IRGC-----WDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNLGG 191
            ||  ||||.   .|||     ||:|||::|..:.. ..|.|.||||.||.|.|:.:.||...|.|
plant   131 KK--DGSKSGHGRRGCLEEGAWDAIHVIQVGSEEE-EMAQYCLTSTIMLSLTTDDESSGKFGLSG 192

  Fly   192 SLTRQQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLRSTQSLADQR 253
            |:.||.:.:..|::.  |:.|:|:|:||:|.|:||:|:::|||||:::|..||....:...|
plant   193 SIRRQMKMELAVADG--HLCNMGRMIEELEGKLRNSLDQVYFGKTREMVCTLRPPAEIVQMR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpbNP_001259877.1 F_actin_cap_B 11..239 CDD:395885 123/236 (52%)
CPBNP_177324.2 F_actin_cap_B 7..238 CDD:395885 123/235 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 244 1.000 Domainoid score I566
eggNOG 1 0.900 - - E1_KOG3174
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3620
Inparanoid 1 1.050 247 1.000 Inparanoid score I1046
OMA 1 1.010 - - QHG54327
OrthoDB 1 1.010 - - D1076134at2759
OrthoFinder 1 1.000 - - FOG0004437
OrthoInspector 1 1.000 - - oto2886
orthoMCL 1 0.900 - - OOG6_103032
Panther 1 1.100 - - LDO PTHR10619
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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