DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpb and capzb

DIOPT Version :9

Sequence 1:NP_001259877.1 Gene:cpb / 33346 FlyBaseID:FBgn0011570 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_009294020.1 Gene:capzb / 335083 ZFINID:ZDB-GENE-030131-7023 Length:274 Species:Danio rerio


Alignment Length:271 Identity:215/271 - (79%)
Similarity:242/271 - (89%) Gaps:0/271 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65
            |:|.|:|||||||||||||||||||.|||||.|.||||||||||||||||:||..||||||||||
Zfish     1 MNEQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

  Fly    66 RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLDHGFAA 130
            ||||||||||||.|.||::||.|||.||||||:|||.||||||::|:|||||||||||||||||.
Zfish    66 RDGDSYRSPWSNKYEPPIDDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAG 130

  Fly   131 VILIKKAGDGSKMIRGCWDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNLGGSLTR 195
            ||||||||||||.|:||||||||||||||::|||||||||||.||||||.|.|||||||||||||
Zfish   131 VILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTTKTGSGTMNLGGSLTR 195

  Fly   196 QQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLRSTQSLADQRQQAAMKQ 260
            |.|:|..||||||||||||::|||||||||:|||||||||||||||||||.:||.|.::...:::
Zfish   196 QMEKDETVSESSPHIANIGRLVEEMENKIRSTLNEIYFGKTKDIVNGLRSIESLPDNQKYRQLQR 260

  Fly   261 DLAAAILRRNV 271
            :|:..:.:|.:
Zfish   261 ELSQVLTQRQI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpbNP_001259877.1 F_actin_cap_B 11..239 CDD:395885 195/227 (86%)
capzbXP_009294020.1 F_actin_cap_B 11..239 CDD:279459 195/227 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580335
Domainoid 1 1.000 423 1.000 Domainoid score I605
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3620
Inparanoid 1 1.050 459 1.000 Inparanoid score I1544
OMA 1 1.010 - - QHG54327
OrthoDB 1 1.010 - - D1076134at2759
OrthoFinder 1 1.000 - - FOG0004437
OrthoInspector 1 1.000 - - oto40388
orthoMCL 1 0.900 - - OOG6_103032
Panther 1 1.100 - - LDO PTHR10619
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4497
SonicParanoid 1 1.000 - - X3143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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