DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpb and Capzb

DIOPT Version :9

Sequence 1:NP_001259877.1 Gene:cpb / 33346 FlyBaseID:FBgn0011570 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_006538567.1 Gene:Capzb / 12345 MGIID:104652 Length:306 Species:Mus musculus


Alignment Length:276 Identity:214/276 - (77%)
Similarity:243/276 - (88%) Gaps:2/276 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYNR 66
            |:.|:|||||||||||||||||||.|||||.|.||||||||||||||||:||..|||||||||||
Mouse    31 SDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNR 95

  Fly    67 DGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLDHGFAAV 131
            |||||||||||.|.||||||.|||.||||||:|||.||||||::|:|||||||||||||||||.|
Mouse    96 DGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAGV 160

  Fly   132 ILIKKAGDGSKMIRGCWDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNLGGSLTRQ 196
            |||||||||||.|:||||||||||||||::|||||||||||.||||||||.||||||||||||||
Mouse   161 ILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKSGSGTMNLGGSLTRQ 225

  Fly   197 QEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLRSTQSLADQRQQAAMKQD 261
            .|:|..||:.||||||||::||:||||||:|||||||||||||||||||..::.|..:...::::
Mouse   226 MEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSLDAIPDNHKFKQLQRE 290

  Fly   262 LAAAILRRNV--KPES 275
            |:..:.:|.|  :|::
Mouse   291 LSQVLTQRQVYIQPDN 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpbNP_001259877.1 F_actin_cap_B 11..239 CDD:395885 195/227 (86%)
CapzbXP_006538567.1 F_actin_cap_B 35..269 CDD:366473 200/233 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836826
Domainoid 1 1.000 423 1.000 Domainoid score I625
eggNOG 1 0.900 - - E1_KOG3174
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3620
Inparanoid 1 1.050 448 1.000 Inparanoid score I1608
Isobase 1 0.950 - 0 Normalized mean entropy S406
OMA 1 1.010 - - QHG54327
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004437
OrthoInspector 1 1.000 - - oto94165
orthoMCL 1 0.900 - - OOG6_103032
Panther 1 1.100 - - LDO PTHR10619
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4497
SonicParanoid 1 1.000 - - X3143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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