DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpb and capzb

DIOPT Version :9

Sequence 1:NP_001259877.1 Gene:cpb / 33346 FlyBaseID:FBgn0011570 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_031761537.1 Gene:capzb / 100494073 XenbaseID:XB-GENE-490544 Length:277 Species:Xenopus tropicalis


Alignment Length:277 Identity:215/277 - (77%)
Similarity:245/277 - (88%) Gaps:2/277 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYLLCDYN 65
            |:|.|:|||||||||||||||||||.|||||.|.||||||||||||||||:||..||||||||||
 Frog     1 MTEQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYN 65

  Fly    66 RDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVYLWDLDHGFAA 130
            ||||||||||||.|.||||||.|||.||||||:|||.||||||::|:|||||||||||||||||.
 Frog    66 RDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVYLWDLDHGFAG 130

  Fly   131 VILIKKAGDGSKMIRGCWDSIHVVEVQEKTTGRTAHYKLTSTAMLWLQTNKQGSGTMNLGGSLTR 195
            ||||||||||||.|:||||||||||||||::|||||||||||.||||||||.|||||||||||||
 Frog   131 VILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTNKTGSGTMNLGGSLTR 195

  Fly   196 QQEQDANVSESSPHIANIGKMVEEMENKIRNTLNEIYFGKTKDIVNGLRSTQSLADQRQQAAMKQ 260
            |.|:|..||:|||||||||::||:||||||:|||||||||||||||||||..::.|..:...:::
 Frog   196 QMEKDETVSDSSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIVNGLRSIDAIPDNLKYRQLQR 260

  Fly   261 DLAAAILRRNV--KPES 275
            :|:..:.:|.:  :|::
 Frog   261 ELSQVLTQRQIYLQPDN 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpbNP_001259877.1 F_actin_cap_B 11..239 CDD:395885 196/227 (86%)
capzbXP_031761537.1 F_actin_cap_B 11..239 CDD:395885 196/227 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 425 1.000 Domainoid score I617
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 450 1.000 Inparanoid score I1579
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076134at2759
OrthoFinder 1 1.000 - - FOG0004437
OrthoInspector 1 1.000 - - oto104375
Panther 1 1.100 - - LDO PTHR10619
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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