Protein Alignment chinmo and rib

DIOPT Version :9

• Sequence 1: NP_001188680.1
• Gene: chinmo / 33343
• FlyBaseID: FBgn0086758
• Length: 840
• Species: Drosophila melanogaster
• Sequence 2: NP_001261085.1
• Gene: rib / 44855
• FlyBaseID: FBgn0003254
• Length: 680
• Species: Drosophila melanogaster
• Alignment Length: 638
• Identity: 136/638 - (21%)
• Similarity: 206/638 - (32%)
• Gaps: 227/638 - (35%)

  Fly     5 QQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQ 69
            |.:||:||:..:||......|.:.....|..|..|...|:||:::|||.|..|..:.::.|.: .
  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQD-H 79

  Fly    70 CVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGL-----------STETGRL 123
            |.|||.......:||||::||.||..|::......|::|:.||||||           .|.|...
  Fly    80 CSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSSS 144

  Fly   124 AAQQAQQHMGDLSPLDSPTGRRSVRNSLSGG----------------------------SSSIVP 160
            .|..|:...|..|...|.....|...|.|..                            |:|.:|
  Fly   145 GAGGAKPQNGSASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIP 209

  Fly   161 GGVGIGLGGGATGANSMSGMGIGNGLSLAGMAAGGGMAAAANAAASSLSTL---AASANIVDR-- 220
            .|........||..::.||.|          .|||......:|||:.|:::   ||..|.:.|
  Fly   210 AGEAPLTPTQATPHSAASGAG----------EAGGQWPLTPSAAAAMLNSVYESAADMNPLKRKK 264

  Fly   221 CGSAGANIISG-----------SAAGIGGSHSGGAGNGSG----------TVGIGGNGVGSG--- 261
            ..:..:.::||           :.|....|...|..|.:|          |....|.||..|
  Fly   265 LSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAGLGVSGGERN 329

  Fly   262 --------GGNNGPISLGSGAGAAHHLGGSTG---------------------ILKQECDSLM-- 295
                    ||:..|:|..:........|.|.|                     .:::...:|.
  Fly   330 HSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQAS 394

  Fly   296 -------------------------------HPGGSSSSSGMGYT-------------------- 309
                                           .|.|:.||.|..|:
  Fly   395 RKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHHSEV 459

  Fly   310 -------HVPPIYRPINYEPPRKRAIVRSPYSEQ--EQRGSVLRDGSKSSECPSPINKPPYHRPS 365
                   |||..:......||...|::...:.:|  |.||..:            ..:...|..:
  Fly   460 KRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDM------------AGREALHAMA 512

  Fly   366 SSAS--------STAPTEADTM---HSERA-SPQSSRY-----------ENHSPSTTAGNGNATS 407
            .:|:        |::|.|.|..   |..|: |||...|           |.|.
  Fly   513 LAAAAHAAANRLSSSPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEMEKHE------------ 565

  Fly   408 SLERIVKSERNNGSANEANDDDRELMDESTDNGAEDL---RVKLENLKYSPPP 457
              :.|:|.||:.....:|:|::    |...:: .|||   |.:.....|||.|
  Fly   566 --QNIIKRERDQDEREDADDEE----DHEQEH-VEDLSLARKERPPSPYSPQP 611

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chinmo	NP_001188680.1	BTB	22..116	CDD:279045	32/93 (34%)
		BTB	33..116	CDD:197585	31/82 (38%)
		C2H2 Zn finger	519..540	CDD:275368
		C2H2 Zn finger	547..568	CDD:275368
rib	NP_001261085.1	BTB	33..133	CDD:279045	34/100 (34%)
		BTB	44..133	CDD:197585	33/89 (37%)
		HTH_psq	373..417	CDD:283007	1/43 (2%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I10373
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm40394
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	5.020