DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chinmo and bcl6aa

DIOPT Version :9

Sequence 1:NP_001188680.1 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_021332488.1 Gene:bcl6aa / 393707 ZFINID:ZDB-GENE-040426-1696 Length:748 Species:Danio rerio


Alignment Length:693 Identity:146/693 - (21%)
Similarity:231/693 - (33%) Gaps:176/693 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLF-ENTPTNGQCV 71
            |:::...:|::.:..:.|...|:|.||.:..:...|:|||.:|.|||..|..:| ::...|...:
Zfish    52 CIQFTRHASDVLLNLNRLRSRDILTDVTILVNRQQFRAHKTVLMACSGLFYSIFTDSHKCNLNAI 116

  Fly    72 IILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQHMGD-- 134
            .:.....|:..|.||||||...:.:.:..:.:.:.:|..||:                .|:.|  
Zfish   117 SLDPKVDPEGFAILLEFMYTSRLALKESLIMAIMNTAIYLQM----------------DHVVDTC 165

  Fly   135 -------------------LSPLDSPTGRRSVR-----NSLSGGSSSIVPGGVGIGLGGGATGAN 175
                               :|||..|....|.|     :::||.|::.        ..|...|..
Zfish   166 HRFIKSSDSSIKLPREDFLVSPLLLPQDIHSYRPHEVMDNVSGRSATF--------RDGRPYGVC 222

  Fly   176 SMSGMGIGNGLSLAGMAAGGGMAAAANAAASSLSTLA--ASANIV--DRCGSAGAN--------- 227
            ..:|:...|...|.|.....|..........:.:|.:  :...|:  ..|..:..|         
Zfish   223 MFNGVNAPNNSYLYGQFPMQGFPFPLCKLTDTKNTFSDFSKGGIIHHKHCSPSDGNNPVLNDFTR 287

  Fly   228 -IISGSAA----GIGGSHSGGAGNGSGTVGIGG--NGVGSGGGNNGPISLG------SG----AG 275
             ..|||:|    |...|...|.........:.|  :.:|.....:|.|||.      ||    :.
Zfish   288 SATSGSSAVCHTGSYSSRELGRDEDMKRETLEGVVHSIGMSSRKHGFISLAQEQQRESGKEQSSL 352

  Fly   276 AAHHLGG---STGI---------------LKQECDSLMHPGGSSSSSGMGYTHV--PPIYRPINY 320
            |..||..   |.||               ||.:|.. ..|..||||........  ||..:  ..
Zfish   353 AEEHLSHQHYSMGISSNGRKTLMSSPQSPLKSDCQP-NSPTESSSSKNAALAQALQPPTSQ--GT 414

  Fly   321 EPPRKRAIVRSPYSEQEQRGSVLRDGSKSSECPSPINKPPYHRPSSSASSTAPTEADTMH----- 380
            ..|:.|       :.::.:..||...||..|...|  .|..|.|.....|......|:.|     
Zfish   415 SDPKAR-------NWKKYKFIVLNQSSKEEETNPP--DPGMHSPQRPGLSAFLHHVDSEHPDSKV 470

  Fly   381 ----SERA----SPQSSR----------------------YENHSPSTTAGNGNATSSLERIVKS 415
                ||:.    :||:||                      |.||...::.|:.:...|  .:..:
Zfish   471 TTKISEQGEDFPAPQASRLNNIINRSLEGSQRNIDSHSSLYMNHLKCSSCGSQSPQHS--DVCPN 533

  Fly   416 ERNNGSANEANDDDRELMDESTDNG-----------AEDLRVKLENLKYSPPPPPNSNTSSTTPN 469
            ...:..|.|.::...|..|.|.:||           ||:..:|...|:.....|...:.....  
Zfish   534 TSASRLAEEMSEMHSEYSDSSCENGTYFCNECDSKFAEEEALKRHTLQVHSDKPYKCDRCQAA-- 596

  Fly   470 TLLENLKADGTLSSNLAASIAPAD-MLNVWNA---TKMNNKNSVNTADGKK-LKCLYCDRLYGYE 529
                 .:..|.|:|:......... ..|:..|   ...|.|.......|:| .||..|...:...
Zfish   597 -----FRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPYKCETCGARFVQV 656

  Fly   530 TNLRAHIRQRHQGIR-VPCPFCERTFTRNNTVRRHIAREHKQE 571
            .:||||: ..|.|.: .||..|...|....|::.|: |.|..|
Zfish   657 AHLRAHV-LIHTGEKPYPCEICGTRFRHLQTLKSHL-RIHTGE 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_001188680.1 BTB 22..116 CDD:279045 27/94 (29%)
BTB 33..116 CDD:197585 24/83 (29%)
C2H2 Zn finger 519..540 CDD:275368 6/20 (30%)
C2H2 Zn finger 547..568 CDD:275368 6/20 (30%)
bcl6aaXP_021332488.1 BTB 66..172 CDD:306997 29/121 (24%)
DMP1 <284..558 CDD:311295 61/287 (21%)
C2H2 Zn finger 562..583 CDD:275368 4/20 (20%)
C2H2 Zn finger 590..610 CDD:275368 3/26 (12%)
zf-H2C2_2 602..627 CDD:316026 4/24 (17%)
C2H2 Zn finger 618..638 CDD:275368 4/19 (21%)
zf-H2C2_2 630..655 CDD:316026 7/24 (29%)
C2H2 Zn finger 646..666 CDD:275368 6/20 (30%)
zf-H2C2_2 658..683 CDD:316026 10/25 (40%)
C2H2 Zn finger 674..694 CDD:275368 6/20 (30%)
zf-H2C2_2 687..711 CDD:316026 4/12 (33%)
C2H2 Zn finger 702..720 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.