Protein Alignment chinmo and ab

DIOPT Version :10

• Sequence 1: NP_722717.2
• Gene: chinmo / 33343
• FlyBaseID: FBgn0086758
• Length: 840
• Species: Drosophila melanogaster
• Sequence 2: NP_476562.1
• Gene: ab / 34560
• FlyBaseID: FBgn0264442
• Length: 904
• Species: Drosophila melanogaster
• Alignment Length: 940
• Identity: 202/940 - (21%)
• Similarity: 309/940 - (32%)
• Gaps: 301/940 - (32%)

  Fly     4 QQQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNG 68
            ||.:.||||.|.|::..:|.:|...:...||.|:||...|.|||::|:|||..|..|.:..|
  Fly    75 QQHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANP--- 136

  Fly    69 QC---VIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQ 130
             |   ::||.....|::..||.|||.|||:||.|.|..|||:|..||::||:...|.....:|
  Fly   137 -CEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVNGGYPYSKA-- 198

  Fly   131 HMGDLSPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSMSGMGIGNGLSLAGMAAGG 195
                   |.:.....|..|:.:..||:                 ||:|.....|.
  Fly   199 -------LSAALSHNSSNNNNNNSSSN-----------------NSLSNNNNNNN---------- 229

  Fly   196 GMAAAANAAASSLSTLAASANIVDRCGSAGANIISGSAAGIGGSHSGGAGNG-SGTVGIGGNGVG 259
                  |.|.||.....:|....::..:|..|..:.::.....||:..:.|. ||::....|...
  Fly   230 ------NNAESSNHNKISSYLSPNQTSAACNNSSNSNSNNHSSSHNNSSSNNISGSLNSSLNSPF 288

  Fly   260 SGGGNNGPISLGSGAGAAHHLGGSTGILKQECDSLMHPGGSSSSSGMGYTHVPPIYRPINYEPPR 324
            |......|::..|.|.||......|..:.....:.....|||||:..|.|...|..:.:
  Fly   289 SAPQIPPPVTASSAAAAAAAAASLTAAVAAAAAATAASAGSSSSAASGQTSGTPAIQEL------ 347

  Fly   325 KRAIVRSPYSEQEQRGSVLRDGSKSSECPSPINKP-PYHRPSSSASS----------------TA 372
                                   |:|...||:..| |  .||.::||                |.
  Fly   348 -----------------------KASSAASPVRNPNP--NPSKASSSNHWDMGEMEGSRKSHLTP 387

  Fly   373 PTE-----ADTMHSERA-SPQSSRYENHSPSTTAGNGNATSSLERIVKSERNNGSANEANDDDR- 430
            |.:     ||...::.. ||:....:...|  .||....|          ||....:.:.|.:|
  Fly   388 PPQKRIKSADLFRAQHGISPERLLLDREFP--VAGQHPLT----------RNRSGRDTSKDRERN 440

  Fly   431 -ELMDESTDNGAEDLRVKLENLKY--SPPPPPNSNTSSTTPNTLLENLKADGTLS--SNLAASIA 490
             ||.:.......|:...:..|.|:  ......:||:|.|.|:...:. :.||||.  .|..:...
  Fly   441 LELRESLLGQALENSNGQQANPKHELGQSAGEDSNSSDTEPSDRGDG-QHDGTLDGIDNQRSHSF 504

  Fly   491 PADMLNVWN---------------ATKMNNKNSVNTADGKKLKCLYCDRLYGYETNLRAHIRQRH 540
            |...|.:..               .::.:.:..|...|.:  .|..|.::|.....||.|:..:|
  Fly   505 PNAFLGLQGIPGLLPGPSGINSDFVSRRSLEMRVRATDPR--PCPKCGKIYRSAHTLRTHLEDKH 567

  Fly   541 ---QGIRVPCPFCERTFTRNNTVRRHIAREHKQEIGLA------------------------AGA 578
               .|.|  |..|.......|::..|::|:|:   |::                        ||.
  Fly   568 TVCPGYR--CVLCGTVAKSRNSLHSHMSRQHR---GISTKDLPVLPMPSAFDPELASRLLAKAGV 627

  Fly   579 TIAPAHLAAAAAASAAATAAASNHSPXEAAATAAASVVMNANKEAAKQRKRKTLKMALEKCMQRR 643
            .|:||.|.|.|             || ..:.::.
  Fly   628 KISPAELRARA-------------SPTGGSGSSG------------------------------- 648

  Fly   644 DAMVAETTTGAGGDGAE---------AGGESGEAVDGAGSEE---------GAGSEGTEPLTYEQ 690
                     |.||.|:.         :||...:|.|.....|         |.|...::...|.:
  Fly   649 ---------GGGGGGSSQAKLDLSNASGGPMDDAEDSDDDPEDLTTGNGLYGMGGSSSDLSRYHE 704

  Fly   691 Q------QQRMHQELTQQIRAAMAAEQAAEAMDSTMNT----------TVNTTTTTTTTTNTTGA 739
            .      ..||..|     .||:||..||......:..          ::..|.....|.||.|.
  Fly   705 SLLSNFGHARMRNE-----AAAVAATAAALGQPKDLGVQLPNSNAPGQSLLDTYLQFITENTFGM 764

  Fly   740 TSDGCSDAEASDGSDRPMEVD--------EDQPPEPQPG----SELVVVEPKIEVLSESEDEEDR 792
               |.|..:|:..:.|.....        ::.||...||    |:|....|.
  Fly   765 ---GMSQEQAAAAALRAKMAQLNAMGHSLDNLPPGLLPGQFDLSKLAAGNPA------------- 813

  Fly   793 LHMSEAEPDIQAEAIYDH-------MPNTP 815
              ..::.|.:..|.|..|       .||.|
  Fly   814 --FGQSGPGLTIEPIMRHEQAAGNLSPNRP 841

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chinmo	NP_722717.2	BTB_POZ_BAB-like	31..115	CDD:349624	38/86 (44%)
		C2H2 Zn finger	519..540	CDD:275368	6/20 (30%)
		C2H2 Zn finger	547..568	CDD:275368	5/20 (25%)
ab	NP_476562.1	BTB_POZ_BAB-like	102..185	CDD:349624	38/86 (44%)
		zf-Di19	545..597	CDD:428539	14/53 (26%)
		C2H2 Zn finger	546..567	CDD:275371	6/20 (30%)
		C2H2 Zn finger	575..596	CDD:275371	5/20 (25%)