DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and LOC3290595

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_061504414.1 Gene:LOC3290595 / 3290595 VectorBaseID:AGAMI1_013978 Length:232 Species:Anopheles gambiae


Alignment Length:209 Identity:53/209 - (25%)
Similarity:82/209 - (39%) Gaps:60/209 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQCVIILEATTPDNMAALLEFMYKG 92
            ::||.||.:.|:....:||||:|...|..|..:|...||....|:|......| :.||::|:|.|
Mosquito    31 AELLVDVTICCESRKLRAHKLVLVLGSPFFRSIFNEVPTPHPVVMIYNVKYED-LDALVKFLYTG 94

  Fly    93 EVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQHMGDLSPLDSPTGRRSVRNSLSGGSSS 157
            |:.|.:|.|.|.|::|..||:...||....|      |..|||:                     
Mosquito    95 ELSVERERLPSLLEAARYLQLDEFSTLLPYL------QETGDLN--------------------- 132

  Fly   158 IVPGGVGIGLGGGATGANSMSGMGIGNGLSLAGMAAGGGMAAAANAAASSLSTL----------- 211
                            .|.:|.:...|.:||.     .......|.:|:.:||:           
Mosquito   133 ----------------ENLLSAVNAFNSMSLL-----MDRTNQTNDSATIMSTICMLTTNDPPQP 176

  Fly   212 AASANIVDRCGSAG 225
            :.||:::...|.||
Mosquito   177 STSASVLPYNGEAG 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 31/83 (37%)
C2H2 Zn finger 519..540 CDD:275368
C2H2 Zn finger 547..568 CDD:275368
LOC3290595XP_061504414.1 None
Blue background indicates that the domain is not in the aligned region.

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