DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and Zbtb9

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_998729.1 Gene:Zbtb9 / 294289 RGDID:1303050 Length:465 Species:Rattus norvegicus


Alignment Length:353 Identity:82/353 - (23%)
Similarity:116/353 - (32%) Gaps:135/353 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DVILSCDGVVFKAHKLILAACSKKFAD--LFENTP----TNGQCVIILEATTPDNMAALLEFMYK 91
            ||.|...|...:|||.:|||.|..|.|  |..:.|    .|     ::||   |....||:.:|.
  Rat    49 DVSLLVQGRELRAHKAVLAAASPYFHDKLLLGDAPRLTLPN-----VIEA---DAFEGLLQLIYS 105

  Fly    92 GEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQHMGDLSPLDSPTGRRSVRNSLSGGSS 156
            |.:|:..:||.:.|..|..||:..:......:           |..|::.:|..|     .||:|
  Rat   106 GSLHLPLDALPAHLLVASGLQMWQVVDRCSEI-----------LRELETSSGISS-----GGGAS 154

  Fly   157 SIV------PGGVGI--------GLGGGAT----GANSMSGMGIGNGLSLAGM------------ 191
            |:.      .||..|        |....:|    ...|.||   |.|..|.||            
  Rat   155 SLTLLSTTSAGGWCIRSSPFQNPGRSSASTENSAAPESPSG---GEGGELEGMLQIQVKVEEEEE 216

  Fly   192 --------------AAGGGMAAAANAAASSLSTLAA--------------------------SAN 216
                          ...|.::.|..:.....|||.:                          ..|
  Rat   217 QRSAAPPFQTPQPERVSGAVSQACGSHPLPTSTLPSKPSEDENSTLDPPAPPVQTSQILYVNQEN 281

  Fly   217 IVDRCGSAGANIISGSA---------------------AGIGGSHSGGAGNGS-GTVGIGGNGVG 259
            :..:..::|...:||.|                     ...||..:.|||:.| ..|.:.||.:.
  Rat   282 VECKEETSGGRTLSGGAKEKTKVLPGENSEENGELRYLLSSGGGETSGAGDPSWKPVDLHGNEIL 346

  Fly   260 SGGGNNGPISLGSGAGAAHH----LGGS 283
            ||||..|      |.|.|.|    |||:
  Rat   347 SGGGGPG------GTGQAMHGPVKLGGT 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 30/87 (34%)
C2H2 Zn finger 519..540 CDD:275368
C2H2 Zn finger 547..568 CDD:275368
Zbtb9NP_998729.1 BTB_POZ 30..140 CDD:453885 31/109 (28%)
C2H2 Zn finger 380..397 CDD:275368
C2H2 Zn finger 405..425 CDD:275368
zf-C2H2 405..425 CDD:395048
C2H2 Zn finger 432..449 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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