Protein Alignment chinmo and Trl

DIOPT Version :10

• Sequence 1: NP_722717.2
• Gene: chinmo / 33343
• FlyBaseID: FBgn0086758
• Length: 840
• Species: Drosophila melanogaster
• Sequence 2: NP_001261846.1
• Gene: Trl / 2768981
• FlyBaseID: FBgn0013263
• Length: 623
• Species: Drosophila melanogaster
• Alignment Length: 859
• Identity: 146/859 - (16%)
• Similarity: 238/859 - (27%)
• Gaps: 394/859 - (45%)

  Fly     7 FCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQC- 70
            :.|.|..:.::|......|.....|.|..|:..|..|.|||::|.|.|....||.:|||    |
  Fly     9 YSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTP----CK 69

  Fly    71 --VIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTET---GRLAAQQAQ- 129
              |::|.....:::.|||||:|:|||.|....|.|.|::|:.|.::||:.:|   ........|
  Fly    70 HPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHSIQL 134

  Fly   130 QHM----GDLSPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSMSGMGIGNGLSLAG 190
            |||    .|...|
  Fly   135 QHMIPQHHDQDQL---------------------------------------------------- 147

  Fly   191 MAAGGGMAAAANAAASSLSTLAASANIVDRCGSAGANIISGSAAGIGGSHSGGAGNGSGTVGIGG 255
                  :|..|.|...::     .|.:|:
  Fly   148 ------IATIATAPQQTV-----HAQVVE------------------------------------ 165

  Fly   256 NGVGSGGGNNGPISLGSGAGAAHHLGGSTGILKQECDSLMHPGGSSSSSGMGYTHVPPIYRPINY 320
                                ..||.|           .::.....::::|
  Fly   166 --------------------DIHHQG-----------QILQATTQTNAAG--------------- 184

  Fly   321 EPPRKRAIVRSPYSEQEQRGSVLRDGSKSSEC------PSPINKPPYHRPSSSASSTAPTEA-DT 378
                            :|:..|..|.:|..:.      |:...||...:.|.:|...:..|. ||
  Fly   185 ----------------QQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDT 233

  Fly   379 MHSERASPQSSRYENHSPSTTAGNGNATSSLERIVKSERNNGSANEANDDDRELMDESTDNGAED 443
            :..             :|:::.|:|    |:::::                       .:||||
  Fly   234 IMG-------------TPTSSHGSG----SVQQVL-----------------------GENGAE- 257

  Fly   444 LRVKLENLKYSPPPPPNSNTSSTTPNTLLENLKADG--TLSSN-----LAASIAPADMLNVWNAT 501
                             ....|:||....|..|.:.  |:..|     .:|:.|..::.....||
  Fly   258 -----------------GQLLSSTPIIKSEGQKVETIVTMDPNNMIPVTSANAATGEITPAQGAT 305

  Fly   502 KMNNKNSVNTADGKKLKCLYCDRLYGYETNLRAHIRQRH-QGIRVP-----------CPFCERTF 554
            ..:..|:.......|.|                  |.:| .|...|           ||.|....
  Fly   306 GSSGGNTSGVLSTPKAK------------------RAKHPPGTEKPRSRSQSEQPATCPICYAVI 352

  Fly   555 TRNNTVRRHIAREHKQEIGLAAGATIAPAHLAAAAAASAAATAAASNHSPXEAAATAAASVVMNA 619
            .::..:|||:...|..:.|:
  Fly   353 RQSRNLRRHLELRHFAKPGV--------------------------------------------- 372

  Fly   620 NKEAAKQRKRKT-LKMALEKCMQRRDAMVAETTT---GAGGDGAEAGGESGEAVDGAGSEEGAGS 680
                .|::|.|: ....|:..|:.......:.|.   ||||.|: |||:| .|..|..|..|:..
  Fly   373 ----KKEKKSKSGNDTTLDSSMEMNTTAEGDNTVGSDGAGGAGS-AGGQS-SATSGKKSSSGSSG 431

  Fly   681 EGTEPLT---------------------------YEQQQQRMHQELTQQIRAAMAAEQAA----- 713
            .|:..|:                           .:||||:..|:..||.:.||....|.
  Fly   432 SGSGALSSSGSVPQVQTVQSLHTLQGVQVKKDPDAQQQQQQQQQQQQQQQQQAMTVSGATGGQVQ 496

  Fly   714 ---------------------------EAMDSTMNTTVNTTTTTTTTTNTTGATSDGCSDAEASD 751
                                       :.:||:.|.|..||:..........|..........||
  Fly   497 QQVQQVQQQVQQQQQQQQQQQQQLQHHQIIDSSGNITTATTSAQAAAAAQQQAAGQQQQLVAQSD 561

  Fly   752 GSD--RPMEVDEDQ 763
            ||:  .|:.:.:.|
  Fly   562 GSESGAPLSIAQVQ 575

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chinmo	NP_722717.2	BTB_POZ_BAB-like	31..115	CDD:349624	34/86 (40%)
		C2H2 Zn finger	519..540	CDD:275368	1/20 (5%)
		C2H2 Zn finger	547..568	CDD:275368	6/20 (30%)
Trl	NP_001261846.1	BTB_POZ_BAB-like	33..116	CDD:349624	34/86 (40%)
		GAGA	319..372	CDD:462719	13/70 (19%)