DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and LOC1276415

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_315758.4 Gene:LOC1276415 / 1276415 VectorBaseID:AGAMI1_009347 Length:829 Species:Anopheles gambiae


Alignment Length:668 Identity:151/668 - (22%)
Similarity:237/668 - (35%) Gaps:236/668 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQFCLKWNSFSSNLAITFSNLFKSDLLADV-ILSCDG---VVFKAHKLILAACSKKFADLFENTP 65
            :::.|||:|...|:.::.|||:|:|..||| :|:|:|   ....||||||...|..||::|:.||
Mosquito   278 EKYQLKWHSHYQNMNVSLSNLYKNDRYADVMLLTCNGDDSYTIPAHKLILGTSSLYFANIFDKTP 342

  Fly    66 T--NGQCVIILEATTPD----NMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLA 124
            .  |....|:|   .||    :|..|:::||.||..||.:.||..|:..|.|:::||...     
Mosquito   343 VPLNAVTYIVL---PPDLTYRSMQILIQYMYTGESTVSTDVLNEVLRGGEILKIRGLWRN----- 399

  Fly   125 AQQAQQHMGDLSPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSMSGMGIGNGLSLA 189
                          |.|....:..::.||.:|..:|..:           .||.|:|.|..:|..
Mosquito   400 --------------DCPKPATAAGDASSGSNSKELPQHI-----------PSMDGLGAGRFVSPV 439

  Fly   190 GMAAGGGMAAAANAAASSLSTLAASANIVDRCGSAGANIISGSAAGIGGSHSGGAGNGSGTVGIG 254
            .:|...|...|                                                      
Mosquito   440 TVAVPPGTQPA------------------------------------------------------ 450

  Fly   255 GNGVGSGGGNNGPISLGSGAGAAHH-LGGSTG-ILKQECDSLMHPGGSSSSSGMGYTHVPPIY-- 315
                        |.       |.|| |..:|| ::..:.|..:.||......|   |....:|  
Mosquito   451 ------------PF-------APHHVLSSATGPLIHVKRDMAIDPGEVRQGDG---TRTRSLYAA 493

  Fly   316 --RPINYEPPRKRAIVRSPYSE--------------QEQRGSVLRDGSKSSEC---PSPINKPPY 361
              :.|.::...:.|....|:.|              |:|.||     |.|.:|   ||..|    
Mosquito   494 KSQEIVHQRTNETAQPSLPFQELSENHRKERENQEKQQQIGS-----SASGDCATAPSSTN---- 549

  Fly   362 HRPSSSASSTA----------------------PTE-ADTMHSERASP---QSSRYENHSPSTTA 400
               :..|:|||                      |.| :|....|.|.|   :.::.:|.|||..|
Mosquito   550 ---NGDANSTATSVPAQRGSMPQALNFLGVKAEPVEWSDVRAGELAMPGNGEQAQSKNDSPSDPA 611

  Fly   401 GNGNATSSLERIVKSERNNGSANEANDDDRELMDESTDNGAEDLRVKLENLKYSPPP------PP 459
                   :..:::|||..|  |:.|.|:.|.....:.......|..:|.:..::.|.      ..
Mosquito   612 -------NPPKLIKSEECN--ASSATDNSRSSCSSTEQPTYSPLTCELCSETFTIPGEWVRHIEG 667

  Fly   460 NSNTSSTTP---NTLLENLKADGT--LSSNLAAS--IAPADM------------LNVWNATKMNN 505
            :|:.|.|.|   ....|:..||.|  |..:|.|:  :.|||.            |...|....|:
Mosquito   668 HSDPSQTLPKRRRRAEESETADETAALRCDLCATFYVTPADWVRHVQNAHTESELAACNKRVSNH 732

  Fly   506 KNSVNTAD----------------GKKLKCLYCDRLYGYETNLRAHIRQRHQGIRVP--CPFCER 552
            |.:|::..                |.:..|..|::.:....::..| |:.|.|   |  |..|.:
Mosquito   733 KRAVSSTSQHSPTGAAAPAAVGDGGPEKLCNICNKSFPSYASMVIH-RRTHTG---PYCCDICNK 793

  Fly   553 TFTRNNTVRRHIAREHKQ 570
            .||..:.:.||:...|.|
Mosquito   794 GFTVKSNLIRHMRSVHSQ 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 36/93 (39%)
C2H2 Zn finger 519..540 CDD:275368 4/20 (20%)
C2H2 Zn finger 547..568 CDD:275368 6/20 (30%)
LOC1276415XP_315758.4 None

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