DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and LOC1274359

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_061499184.1 Gene:LOC1274359 / 1274359 VectorBaseID:AGAMI1_001917 Length:1021 Species:Anopheles gambiae


Alignment Length:616 Identity:123/616 - (19%)
Similarity:197/616 - (31%) Gaps:237/616 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQC 70
            |:.|.|..|..|:...|.:|.:...:.||.::..|.:||||||:|:.||..|..:|...|:. ..
Mosquito   507 QYLLSWRGFHGNMCKGFHSLQRDGQMVDVTIAAGGKIFKAHKLVLSVCSPYFQKIFLEHPSQ-HP 570

  Fly    71 VIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETG-------------- 121
            ::.:......:||.||:|||.|:|:|..|.|.:|||.||:||||||..|:.              
Mosquito   571 ILFMTDVNSHHMAGLLDFMYSGQVNVKYEDLPNFLKVAEALQVKGLHGESTNDSEERDYQQQQHQ 635

  Fly   122 ---RLA-------AQQAQQHMGDL------SPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGG 170
               ||.       .||.|||...|      ........::..:..|:.....:            
Mosquito   636 HALRLQEQQRLYHQQQQQQHQQQLHQQQQQQQQQQQQQQQQQQQKLAQQRQQL------------ 688

  Fly   171 ATGANSMSGMGIGNGLSLAGMAAGG-----------------------GMAAAANAAASSLSTLA 212
                           |.:|...|..                       ..||||.||....:.:|
Mosquito   689 ---------------LQVAQQQAHAQAQQQHQQQQQQQQQQQQQQQQQQQAAAAAAAQQQAAAVA 738

  Fly   213 ASA---------------NIVDRCGSAGANIISGSAAGIGGSHSGGAGNGSGTVGIGGNGVGSGG 262
            |:.               .::....:|.|.:::....   .:::..|.|.:.:.|..|| :.|.|
Mosquito   739 AAVAHQQQQFQHHRNNFKELMKAKHAAAAVVLNEDYL---NNNASNANNNNSSNGNNGN-LASNG 799

  Fly   263 GNNGPISLGSGAGAAHHLGGSTGILKQECDSLMHPGGSSSSSGMGYTHVPPIYRPINYEPPRKRA 327
            ..|||:|..:.              |:..|:..:....|                       ||.
Mosquito   800 NANGPLSPYAS--------------KKMLDTQKYQKYYS-----------------------KRK 827

  Fly   328 IVRSPYSEQEQRGSVLRDGSKS---------------SECPSPINKPPYHRPSSSASSTA----- 372
            :|:.  .|||.|....:.|.:.               :...|||..|.....:::|::.|     
Mosquito   828 LVQQ--YEQEMRAEKRKLGIEDVIQAAAAANALNLRLNNGGSPIGSPTAVAAAAAAAAAAAAALN 890

  Fly   373 ----PTEADTMHSERASPQSSRYENHSPSTTAGNGNATSSLERIVKSERNNGSANEANDDDRELM 433
                ||...|...:....|..:.::.       :|..|..|.:.:|||       ...||:.|.|
Mosquito   891 PPGTPTNGGTSTDDEQHQQQQQQQHQ-------HGQQTPVLLQNIKSE-------PQYDDEDEGM 941

  Fly   434 DESTDNGAEDLRVKLENLKYSPPPPPNSNTSSTTPNTLLENLKADGTLSSNLAASIAPADMLNVW 498
            :...||                    |::.::...||...|                        
Mosquito   942 EVDQDN--------------------NNSLNAANANTAHNN------------------------ 962

  Fly   499 NATKMNNKNS-----------VNTADGKKLK 518
                 ||.|.           :.|.:||.:|
Mosquito   963 -----NNNNEDDYYGQHDQGVITTGNGKTIK 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 35/83 (42%)
C2H2 Zn finger 519..540 CDD:275368 123/616 (20%)
C2H2 Zn finger 547..568 CDD:275368
LOC1274359XP_061499184.1 None
Blue background indicates that the domain is not in the aligned region.

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