DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and LOC1273860

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_312886.5 Gene:LOC1273860 / 1273860 VectorBaseID:AGAMI1_002030 Length:824 Species:Anopheles gambiae


Alignment Length:880 Identity:191/880 - (21%)
Similarity:314/880 - (35%) Gaps:225/880 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQ 69
            |||||:|::..::|..:...|.....|.||.|..:|...|||:::|:|||..|::||........
Mosquito    49 QQFCLRWHNHQASLLSSLPLLLDQSHLTDVTLMAEGQKIKAHRVVLSACSTFFSELFRTLDGAQY 113

  Fly    70 CVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLS------TETGRLAAQQA 128
            .|::|...:...:|||:.|||.|||:|.:..::..|..||:|.:|||:      .::...:.:.:
Mosquito   114 PVVVLPGASYHAVAALITFMYSGEVNVYEAQISVLLSLAETLGIKGLADFNSNPNKSSTPSTEAS 178

  Fly   129 QQHMGDL-SP-----LDSPTGRRSVRNSLSGGS-SSIVPGGVGIGL---GGGATGANSMSGMGIG 183
            .....|: ||     :.||......|....|.. ..:..|...:.|   .||:.||.:.:..|.|
Mosquito   179 SSRDSDVPSPYHSMKVSSPVDNYFARPYAFGADLFEMRHGAQALNLITNAGGSNGAAASNSAGTG 243

  Fly   184 NGLSLAGMAAGGGMAAAANAAASSLSTLAASANIVDR--------------CGSAGANIISGSA- 233
            :.....|.|...    ||:..|::||| :.|.::..|              |.....|:.:.|| 
Mosquito   244 SAPHSEGFAGNN----AAHTIAANLST-SKSGDLYARFEAERNEQMSAEALCKLNELNLHAESAL 303

  Fly   234 -------------------AGIGGSH------SGGAGNGSGTV-----GIGGNGVGSGG--GNNG 266
                               ||....|      :..||:....|     |..||..|...  ..||
Mosquito   304 LKEKQQQHHLNRSATPVRMAGYAQQHANSPHNTAAAGDARSVVESALFGSFGNDNGRDCKLSANG 368

  Fly   267 PISLGSGAGAAHHLGGSTGILKQE--CDSLMHPGGSSSSSGMGYTHVPPIYRPINYEP------- 322
            |:.||..             ||:|  .||:.|     ......|..||.  .|....|       
Mosquito   369 PLLLGLK-------------LKEEDISDSMHH-----HQLNQSYGSVPS--TPTAQTPGLEDAGR 413

  Fly   323 -PRKRAIVRSPYSEQEQRGS--------------VLRDGSKS-SECPSPI-NKPPYHRPSSSASS 370
             .:..|..|...:.|:...|              .|:..::| ::.|..: :|||...|.||..:
Mosquito   414 VSQPSAATRKTLAAQDTATSKRKKLEQITESLIETLKQSTESGNKLPLHLFSKPPTVTPVSSTQN 478

  Fly   371 TAPTEADTMHSERAS--PQSSRYENHSPSTTAGNGNATSSLERIVKSERNNGSANEANDDDRELM 433
            ........:.:|.||  |::...|:..|: .|.|.||..:...|..:.....:|:...       
Mosquito   479 PYLAHHHFLTNESASKTPENFSLESSHPN-AASNANALRASPSIATATTLGTAASPTT------- 535

  Fly   434 DESTDNGAEDLRVKLENLKYSPPPPPNS---NTSSTTPNTLLENLKADGTLSSNLAASIAPADML 495
                                :.||...|   .|.|::|.:..|||..  ||.....|.:|.... 
Mosquito   536 --------------------TAPPGTGSLLALTPSSSPASANENLIK--TLHITHPAQVAALQQ- 577

  Fly   496 NVWNATKMNNKNSVNTADGKKL--KCLYCDRLYGYETNLRAHIRQRHQGIRVPCPFCERTFTRNN 558
               ...:.:.:::.......||  .|:.|::....:.|||.|: :.||.:|..|..|.......:
Mosquito   578 ---QQQQSSQQSATQKPPSSKLYATCVICNKQLSNQYNLRVHL-ETHQNVRYACQVCSHVSRSKD 638

  Fly   559 TVRRHIAREHKQEIGLAAGATIAPAHLAAAAAASAAATAAASNHSPXEAAATAAASVVMNANKEA 623
            .:|:|::..|.        .|.:|.........|..  .|.|..:..:..|...|:.::|.:::.
Mosquito   639 ALRKHVSYRHP--------GTPSPCDPDTKRKRSKG--NAYSQLAKQDGLAEQQAAAILNHHQQQ 693

  Fly   624 AKQRKRKTLKMALEKCMQRRDAMVAETTTGAGGDGAEAGGESGEAVDGAGSEEGAGSEGTEPLTY 688
            .:|::::          |:...::|..|                            ::|  ||..
Mosquito   694 QQQQQQQ----------QQASNLLANLT----------------------------AQG--PLPS 718

  Fly   689 EQQQQRMHQE----LTQQIRAAMAAEQAAEAMDSTMNTT--------VNTTTTTTTTTNTTGATS 741
            ..|....|.:    |..|..:..|..||.:|.:...:||        .....|......|||||.
Mosquito   719 FLQSIAAHNKSAALLFNQTVSVAALAQAGQACNPATSTTPPAPAGGPAELGATPGKRDATTGATG 783

  Fly   742 DGCSDAEASDGSDRPMEVD----EDQPPEPQPGSE 772
            .|.:|. ..||  ||....    :|..|:..|.::
Mosquito   784 SGETDG-VEDG--RPKSAPDGKVDDSKPDDHPSAQ 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 31/83 (37%)
C2H2 Zn finger 519..540 CDD:275368 6/20 (30%)
C2H2 Zn finger 547..568 CDD:275368 4/20 (20%)
LOC1273860XP_312886.5 BTB_POZ_BAB-like 75..159 CDD:349624 31/83 (37%)
C2H2 Zn finger 600..620 CDD:275371 6/20 (30%)
C2H2 Zn finger 627..648 CDD:275371 4/20 (20%)

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