DRSC/TRiP Functional Genomics Resources

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Protein Alignment chinmo and lov

DIOPT Version :10

Sequence 1:NP_722717.2 Gene:chinmo / 33343 FlyBaseID:FBgn0086758 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_061512548.1 Gene:lov / 1272684 VectorBaseID:AGAMI1_014833 Length:1008 Species:Anopheles gambiae


Alignment Length:904 Identity:180/904 - (19%)
Similarity:297/904 - (32%) Gaps:256/904 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPQQQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTP 65
            |..|:.:.|:||:..:::...|..|.::..|.||.|.|.....:|||::|:|||..|..:|.:||
Mosquito     8 MPDQEHYSLRWNNHQNHILRAFDTLLQTKTLVDVTLVCAETSIRAHKVVLSACSPFFQRVFSDTP 72

  Fly    66 TNGQC---VIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQ 127
                |   ||:|:......:.|:::|||:||:.|.||.|:..:::.|||||:||....  :||..
Mosquito    73 ----CKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLSVLIQAGESLQVRGLVDHP--VAANT 131

  Fly   128 AQQHMGDLSPLDSPTGRRSVRNSLSGGSSSIVPGGVGIGLGGGATGANSMSGMGIGNGLSLAGMA 192
            .       :|.:||.....:..||...:|..:|        ......|..||....:..:.:.:.
Mosquito   132 P-------TPAESPEDFSLLEGSLISPTSPSLP--------SPNFQTNHQSGQLRHHSTTPSSLI 181

  Fly   193 AGGGMAAAANAAASSLSTLA---ASANI----VDRCGSAGANIISGSAAGIGGSHSGGAGNGSGT 250
            :|       ||:...|....   .|.|:    ||.|.|                           
Mosquito   182 SG-------NASKLLLPPQVFADPSINLPSAPVDTCTS--------------------------- 212

  Fly   251 VGIGGNGVGSGGGNNGPISLGSGAGAAHHLGGSTGILKQECDSLMHPGGSSSSSGMGYTHVPPIY 315
                            |:.....|......|        :|       |....|....|.||   
Mosquito   213 ----------------PMPRRKQARPRRRSG--------DC-------GPQDLSSKPSTPVP--- 243

  Fly   316 RPINYEPPRKRAIVRSPYSEQEQRGSVLRDGSKSSECPSPINKPPYHRPSSSASSTAPTEADTMH 380
            :.::.:...:..:...|..|.:...  |.|.....      .|...||..|.....|...|    
Mosquito   244 QTLDDDETERDLLDERPDDEDDLED--LEDDDDED------LKRILHRSQSVDEKLAALVA---- 296

  Fly   381 SERASPQSSRYENHSPSTTAGNGNATSSLERIVK-----SERNNGSANEANDDDRELMDESTDNG 440
            :|.....||.....:|:||    |.||:.||..:     |.|...|||.:    .||:       
Mosquito   297 NENLRTHSSNSLTTTPTTT----NPTSNDERRSRSLHKLSPRKTPSANSS----AELL------- 346

  Fly   441 AEDLRVKLENLKYSPPPPPNSN--------TSSTTPNTLLENLKADGTLSSNLAASIAPADMLNV 497
             .|..::.:.:..|...||.|:        .||::.:.|:.|..:.|:........|..:|. |.
Mosquito   347 -RDADLETDPVAVSSASPPVSDGPENLCMKKSSSSSSCLITNSSSGGSEQHERLGPIDASDN-NT 409

  Fly   498 WNATKMN----NKNSVNTADGKKLKCLYCDRLYGYETNL------------RAHIRQRHQGIRVP 546
            .||...:    ...:...:||.|......|.:.|..:|.            ||.:.:....|..|
Mosquito   410 TNAETSDRAAIRDGTARMSDGSKESSSLSDGISGQLSNRGLLSLKDIRHLNRAALNRSLGSISPP 474

  Fly   547 CPFCERTFTRNN-----TVRRHIAREH--------------KQEIGLAAGATIAPAHLAAAAAAS 592
            ..|...:   ||     ::..|....|              :.|..|.....:.|.|..      
Mosquito   475 PSFSSLS---NNLHPALSLMHHHHHHHHHHGESKRVKLEDREDERSLLHDDMMEPPHFL------ 530

  Fly   593 AAATAAASNHSPXEAAATAAASVVMNANKEAAKQRKRKTLKMALEKCMQRRDAMVAETTTGAGGD 657
            .....|.|.|.. .|...|....:.|::...                   |..||     .||.|
Mosquito   531 DHMDLALSTHQHPLAHHLAHQHHLRNSSPHV-------------------RPPMV-----DAGID 571

  Fly   658 GAEAGGESGEAVDGAGSEEGAGSEGTEPL---TYEQQQQRMHQEL-----TQQIRAAMAAEQAAE 714
            ...:..::...:....:.:.||:.....:   .:.....:.|.:.     |.:..:::|      
Mosquito   572 NNGSNKQNNSGILSNNNNDSAGTNNHNSILNQLHSNPNNKHHHQSGGRPGTPKHPSSIA------ 630

  Fly   715 AMDSTMNTTVNTTTTTTTTTNTTGATSDGCSDAEASDGSDRPMEVDEDQPPEPQPGSELVVVEPK 779
                |.|...|.::::.::.|..|:.|.|.::           .:.....|...|.:     .||
Mosquito   631 ----TNNNNANNSSSSNSSNNNGGSNSTGSNN-----------NLHHGHHPHHHPHN-----GPK 675

  Fly   780 IEVLSESEDEEDRLHMSEAEPDIQAEAIYDHM--PNTPTSPPHIIP--PNDTPTLTSTP 834
                ..:...:|.||    .|.:.....::|.  |..||..|...|  |: ..:||.||
Mosquito   676 ----GSAGGPKDFLH----SPTLNFPPFFNHAEGPPRPTHSPLPFPHMPS-VSSLTLTP 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chinmoNP_722717.2 BTB_POZ_BAB-like 31..115 CDD:349624 35/86 (41%)
C2H2 Zn finger 519..540 CDD:275368 5/32 (16%)
C2H2 Zn finger 547..568 CDD:275368 4/25 (16%)
lovXP_061512548.1 None

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